Evidence map›Paper›PMID 22467499›Full record

ArticleApplied and environmental microbiology2012

Role of Aspergillus niger acrA in arsenic resistance and its use as the basis for an arsenic biosensor.

Se-In Choe, Fabrice N Gravelat, Qusai Al Abdallah, Mark J Lee, Bernard F Gibbs, Donald C Sheppard

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

  1. Insights into conventional and recent technologies for arsenic bioremediation: A systematic review.Environmental science and pollution research international · 2021
    Pooled it
  2. Review
  3. Article
  4. Review
  5. Frontiers in microbiology · 2021
    Article
  6. Article
  7. Diverse Metabolic Capacities of Fungi for Bioremediation.Indian journal of microbiology · 2016
    Review
  8. Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Se-In ChoeDepartment of Microbiology and Immunology, McGill University, Montréal, Québec, Canada .
Fabrice N Gravelat
Qusai Al Abdallah
Mark J Lee
Bernard F Gibbs
Donald C Sheppard
McGill University · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Arsenic contamination of groundwater sources is a major issue worldwide, since exposure to high levels of arsenic has been linked to a variety of health problems. Effective methods of detection are thus greatly needed as preventive measures. In an effort to develop a fungal biosensor for arsenic, we first identified seven putative arsenic metabolism and transport genes in Aspergillus niger, a widely used industrial organism that is generally regarded as safe (GRAS). Among the genes tested for RNA expression in response to arsenate, acrA, encoding a putative plasma membrane arsenite efflux pump, displayed an over 200-fold increase in gene expression in response to arsenate. We characterized the function of this A. niger protein in arsenic efflux by gene knockout and confirmed that AcrA was located at the cell membrane using an enhanced green fluorescent protein (eGFP) fusion construct. Based on our observations, we developed a putative biosensor strain containing a construct of the native promoter of acrA fused with egfp. We analyzed the fluorescence of this biosensor strain in the presence of arsenic using confocal microscopy and spectrofluorimetry. The biosensor strain reliably detected both arsenite and arsenate in the range of 1.8 to 180 μg/liter, which encompasses the threshold concentrations for drinking water set by the World Health Organization (10 and 50 μg/liter).

Indexed as

Drug Resistance, FungalArsenicArsenitesAspergillus nigerBiosensing TechniquesCell MembraneDrinking WaterFluorescent DyesFungal ProteinsGene Expression Regulation, FungalGreen Fluorescent ProteinsGroundwaterRecombinant Fusion ProteinsArsenicarseniteArsenitesDrinking Waterenhanced green fluorescent proteinFluorescent DyesFungal ProteinsGreen Fluorescent ProteinsRecombinant Fusion Proteins

Identifiers

PMID22467499
PMCPMC3346401
OpenAlexW1974382831

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.