Evidence map›Paper›PMID 22461744›Full record

ReviewThe Yale journal of biology and medicine2012

Mass spectrometry-based proteomics for translational research: a technical overview.

Joao A Paulo, Vivek Kadiyala, Peter A Banks, Hanno Steen, Darwin L Conwell

Open access · greenAbstract readReview
In one paragraph

Review in The Yale journal of biology and medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Maternal serum serpin B7 is associated with early spontaneous preterm birth.American journal of obstetrics and gynecology · 2014
    Observational
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Joao A PauloCenter for Pancreatic Disease, Division of Gastroenterology, Hepatology and Endoscopy, Brigham and Women’s Hospital and Department of Medicine, Harvard Medical School, Boston, MA, USA. joao.paulo@childrens.harvard.edu
Vivek Kadiyala
Peter A Banks
Hanno Steen
Darwin L Conwell
Harvard University · US

Funding

STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAYNE I LENCER · 1986 to 2026
$32.4M
Pancreatic Fluid Proteomics in Alcohol Induced Chronic PancreatitisR21DK081703 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI CONWELL, DARWIN LEWIS · 2010 to 2011
$483k
Proteomics of Pancreatic Fluid and Urine in Chronic PancreatitisF32DK085835 · NIDDK · HARVARD MEDICAL SCHOOL · PI PAULO, JOAO A · 2010 to 2012
$166k
NIDDK NIH HHS 1 F32 DK085835-01A1NIDDK NIH HHS 1 R21 DK081703-01A2NIDDK NIH HHS 5 P30 DK034854-24NIDDK NIH HHS F32 DK085835NIDDK NIH HHS P30 DK034854NIDDK NIH HHS R21 DK081703
6 · The paper itself

Abstract

Mass spectrometry-based investigation of clinical samples enables the high-throughput identification of protein biomarkers. We provide an overview of mass spectrometry-based proteomic techniques that are applicable to the investigation of clinical samples. We address sample collection, protein extraction and fractionation, mass spectrometry modalities, and quantitative proteomics. Finally, we examine the limitations and further potential of such technologies. Liquid chromatography fractionation coupled with tandem mass spectrometry is well suited to handle mixtures of hundreds or thousands of proteins. Mass spectrometry-based proteome elucidation can reveal potential biomarkers and aid in the development of hypotheses for downstream investigation of the molecular mechanisms of disease.

Indexed as

AnimalsChemical FractionationHumansMass SpectrometryPeptidesProteomicsTranslational Research, BiomedicalPeptidesbiomarkerschronic pancreatitismass spectrometrypancreas

Identifiers

PMID22461744
PMCPMC3313540
OpenAlexW1906844615

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.