Evidence map›Paper›PMID 22461631›Full record

ArticleThe Journal of biological chemistry2012

Familial Alzheimer disease presenilin-1 mutations alter the active site conformation of γ-secretase.

De-Ming Chau, Christina J Crump, Jennifer C Villa, David A Scheinberg, Yue-Ming Li

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 62 citations in OpenAlex.

  1. Towards a Unitary Hypothesis of Alzheimer's Disease Pathogenesis.Journal of Alzheimer's disease : JAD · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. γ-Secretase in Alzheimer's disease.Experimental & molecular medicine · 2022
    Review
  6. Imaging of Cancer γ-Secretase Activity Using an Inhibitor-Based PET Probe.Clinical cancer research : an official journal of the American Association for Cancer Research · 2021
    Article
  7. Article
  8. Article
  9. A Pentacyclic Triterpene fromACS chemical neuroscience · 2020
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. GSAP modulates γ-secretase specificity by inducing conformational change in PS1.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  15. Review
  16. Article
  17. Review
  18. Structural and Chemical Biology of Presenilin Complexes.Cold Spring Harbor perspectives in medicine · 2017
    Review
  19. Article
  20. Bidirectional regulation of Aβ levels by Presenilin 1.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

De-Ming ChauMolecular Pharmacology and Chemistry Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065 and the Department of Pharmacology, Weill Cornell Graduate School of Medical Sciences of Cornell University, New York, NY 10021.
Christina J CrumpMolecular Pharmacology and Chemistry Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065 and the Department of Pharmacology, Weill Cornell Graduate School of Medical Sciences of Cornell University, New York, NY 10021.
Jennifer C VillaMolecular Pharmacology and Chemistry Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065 and the Department of Pharmacology, Weill Cornell Graduate School of Medical Sciences of Cornell University, New York, NY 10021.
David A ScheinbergMolecular Pharmacology and Chemistry Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065 and the Department of Pharmacology, Weill Cornell Graduate School of Medical Sciences of Cornell University, New York, NY 10021.
Yue-Ming LiMolecular Pharmacology and Chemistry Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065 and the Department of Pharmacology, Weill Cornell Graduate School of Medical Sciences of Cornell University, New York, NY 10021. Electronic address: liy2@mskcc.org.
Cornell University · USMemorial Sloan Kettering Cancer Center · US

Funding

T LYMPHOCYTE SUBSET FUNCTION POST-TRANSPLANTATIONP01CA023766 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI PAMER, ERIC G. · 1985 to 2023
$59.0M
Regulation and Function of Gamma-SecretaseR01AG026660 · NIA · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI LI, YUEMING · 2005 to 2015
$3.5M
Predoctoral Training in Pharmacological SciencesT32GM073546 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI GROSS, STEVEN S · 2006 to 2020
$3.1M
NCI NIH HHS P01 CA023766NIA NIH HHS R01 AG026660NIA NIH HHS R01-AG026660NIGMS NIH HHS T32 GM073546NIGMS NIH HHS T32 GM073546-01A1 9NIGMS NIH HHS T32 GM073546-04
6 · The paper itself

Abstract

Presenilin-1 (PS1) is the catalytic subunit of γ-secretase, and mutations in this protein cause familial Alzheimer Disease (FAD). However, little is known about how these mutations affect the active site of γ-secretase. Here, we show that PS1 mutations alter the S2 subsite within the active site of γ-secretase using a multiple photoaffinity probe approach called "photophore walking." Moreover, we developed a unique in vitro assay with a biotinylated recombinant Notch1 substrate and demonstrated that PS1 FAD mutations directly and significantly reduced γ-secretase activity for Notch1 cleavage. Substitution of the Notch Cys-1752 residue, which interacts with the S2 subsite, with Val, Met, or Ile has little effect on wild-type PS1 but leads to more efficient substrates for mutant PS1s. This study indicates that alteration of this S2 subsite plays an important role in determining the activity and specificity of γ-secretase for APP and Notch1 processing, which provides structural basis and insights on how certain PS1 FAD mutations lead to AD pathogenesis.

Indexed as

Mutation, MissenseAlzheimer DiseaseAmino Acid SubstitutionAmyloid Precursor Protein SecretasesCatalytic DomainGenetic Diseases, InbornHEK293 CellsHumansPresenilin-1Receptor, Notch1Amyloid Precursor Protein SecretasesNOTCH1 protein, humanPresenilin-1PSEN1 protein, humanReceptor, Notch1

Identifiers

PMID22461631
PMCPMC3366784
OpenAlexW2156217397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.