Evidence map›Paper›PMID 22461179›Full record

ArticleAmerican journal of physiology. Regulatory, integrative and comparative physiology2012

Systems genetic analysis of multivariate response to iron deficiency in mice.

Lina Yin, Erica L Unger, Leslie C Jellen, Christopher J Earley, Richard P Allen, Ann Tomaszewicz, James C Fleet, Byron C Jones

Abstract read
In one paragraph

Article in American journal of physiology. Regulatory, integrative and comparative physiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Altered iron metabolism and iron therapy in restless legs syndrome.Journal of neural transmission (Vienna, Austria : 1996) · 2026
    Review
  2. Article
  3. Review
  4. Genetic differences in ethanol consumption: effects on iron, copper, and zinc regulation in mouse hippocampus.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2021
    Article
  5. Article
  6. Article
  7. Article
  8. In silico mapping of quantitative trait loci (QTL) regulating the milk ionome in mice identifies a milk iron locus on chromosome 1.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  9. Review
  10. Animal models of RLS phenotypes.Sleep medicine · 2017
    Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Physiology of iron metabolism.Transfusion medicine and hemotherapy : offizielles Organ der Deutschen Gesellschaft fur Transfusionsmedizin und Immunhamatologie · 2014
    Review
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lina YinGraduate Program in Neuroscience,The Pennsylvania State University, PA 16802, USA.
Erica L Unger
Leslie C Jellen
Christopher J Earley
Richard P Allen
Ann Tomaszewicz
James C Fleet
Byron C Jones

Funding

THE IRON-DOPAMINE CONNECTIONP01AG021190 · NIA · JOHNS HOPKINS UNIVERSITY · PI EARLEY, CHRISTOPHER J · 2004 to 2009
$10.0M
Diet by Gene Interactions Affecting Calcium and Bone MetabolismR21ES019103 · NIEHS · PURDUE UNIVERSITY · PI FLEET, JAMES C. · 2009 to 2010
$752k
Analysis of Genetic Variation in Brain Iron Regulation during Iron DeficiencyF31NS060393 · NINDS · PENNSYLVANIA STATE UNIVERSITY, THE · PI JONES, LESLIE CLAIRE · 2008 to 2009
$77k
NIA NIH HHS P01 AG-021190NIEHS NIH HHS ES-019103NINDS NIH HHS F31NS060393
6 · The paper itself

Abstract

The aim of this study was to identify genes that influence iron regulation under varying dietary iron availability. Male and female mice from 20+ BXD recombinant inbred strains were fed iron-poor or iron-adequate diets from weaning until 4 mo of age. At death, the spleen, liver, and blood were harvested for the measurement of hemoglobin, hematocrit, total iron binding capacity, transferrin saturation, and liver, spleen and plasma iron concentration. For each measure and diet, we found large, strain-related variability. A principal-components analysis (PCA) was performed on the strain means for the seven parameters under each dietary condition for each sex, followed by quantitative trait loci (QTL) analysis on the factors. Compared with the iron-adequate diet, iron deficiency altered the factor structure of the principal components. QTL analysis, combined with PosMed (a candidate gene searching system) published gene expression data and literature citations, identified seven candidate genes, Ptprd, Mdm1, Picalm, lip1, Tcerg1, Skp2, and Frzb based on PCA factor, diet, and sex. Expression of each of these is cis-regulated, significantly correlated with the corresponding PCA factor, and previously reported to regulate iron, directly or indirectly. We propose that polymorphisms in multiple genes underlie individual differences in iron regulation, especially in response to dietary iron challenge. This research shows that iron management is a highly complex trait, influenced by multiple genes. Systems genetics analysis of iron homeostasis holds promise for developing new methods for prevention and treatment of iron deficiency anemia and related diseases.

Indexed as

Iron DeficienciesAnalysis of VarianceAnemia, Iron-DeficiencyAnimalsBody WeightFemaleGene ExpressionHemoglobinsHomeostasisIronMaleMiceMice, Inbred StrainsMultivariate AnalysisPolymorphism, GeneticQuantitative Trait LociHemoglobinsIron

Identifiers

PMID22461179
PMCPMC3378346

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.