Evidence map›Paper›PMID 22460952›Full record

ArticleNature2012

Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β.

Han Cho, Xuan Zhao, Megumi Hatori, Ruth T Yu, Grant D Barish, Michael T Lam, Ling-Wa Chong, Luciano DiTacchio, Annette R Atkins, Christopher K Glass and 5 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 642 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
642citing papers in PubMed, 1 pooled it
31.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

642 citing papers in PubMed, 1 synthesis or guideline pooled it, 1,029 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Review
  4. Article
  5. Article
  6. Article
  7. Berberine alleviates alcoholic liver diseaseactivating intestinal nuclear receptor subfamily 1 group D member 1.Journal of traditional Chinese medicine = Chung i tsa chih ying wen pan · 2026
    Article
  8. The circadian clock controls hepatic stellate cell activation via a BMAL1/CK1ε/REV-ERBα/transgelin signaling pathway.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  9. Review
  10. Article
  11. Review
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  13. How nature discovers rare Turing islands: Exploration by common limit cycles.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  14. Article
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582 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Han ChoGene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, California 92037, USA.
Xuan Zhao
Megumi Hatori
Ruth T Yu
Grant D Barish
Michael T Lam
Ling-Wa Chong
Luciano DiTacchio
Annette R Atkins
Christopher K Glass
Christopher Liddle
Johan Auwerx
Michael Downes
Satchidananda Panda
Ronald M Evans
Salk Institute for Biological Studies · USUniversity of California San Diego · USÉcole Polytechnique Fédérale de Lausanne · CHHoward Hughes Medical Institute · USWestmead Institute · AU

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
ProteomicsU19DK062434 · NIDDK · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI O'MALLEY, BERT W · 2002 to 2011
$37.4M
HORMONAL REGULATION OF MAMMALIAN GENE EXPRESSIONR37DK057978 · NIDDK · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI EVANS, RONALD M · 2000 to 2019
$16.0M
Spatial Regulation of Developmental Gene ExpressionR01HL105278 · NHLBI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI EVANS, RONALD M · 2011 to 2019
$4.0M
Cross-talk between the circadian clock and the cAMP signaling pathwayR01DK091618 · NIDDK · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI MONTMINY, MARC R, PANDA, SATCHIDANANDA · 2011 to 2015
$3.2M
Translational Cardiovascular Science and MedicineT32HL007770 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI EVANS, RONALD M. · 1993 to 2007
$2.8M
Hormonal Regulation of Mammalian Gene ExpressionR01DK057978 · NIDDK · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI EVANS, RONALD M · 2021 to 2024
$2.6M
Molecular Mechanisms of Inflammation, Steatosis and Hepatic Insulin ResistanceR24DK090962 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI OLEFSKY, JERROLD MICHAEL · 2010 to 2011
$1.5M
Howard Hughes Medical InstituteNCI NIH HHS P30 CA014195NHLBI NIH HHS HL105278NHLBI NIH HHS R01 HL105278NHLBI NIH HHS T32 HL007770NHLBI NIH HHS T32-HL007770NIDDK NIH HHS DK057978NIDDK NIH HHS DK062434NIDDK NIH HHS DK090962NIDDK NIH HHS DK091618NIDDK NIH HHS R01 DK057978NIDDK NIH HHS R01 DK091618NIDDK NIH HHS R24 DK090962NIDDK NIH HHS R37 DK057978NIDDK NIH HHS U19 DK062434
6 · The paper itself

Abstract

The circadian clock acts at the genomic level to coordinate internal behavioural and physiological rhythms via the CLOCK-BMAL1 transcriptional heterodimer. Although the nuclear receptors REV-ERB-α and REV-ERB-β have been proposed to form an accessory feedback loop that contributes to clock function, their precise roles and importance remain unresolved. To establish their regulatory potential, we determined the genome-wide cis-acting targets (cistromes) of both REV-ERB isoforms in murine liver, which revealed shared recognition at over 50% of their total DNA binding sites and extensive overlap with the master circadian regulator BMAL1. Although REV-ERB-α has been shown to regulate Bmal1 expression directly, our cistromic analysis reveals a more profound connection between BMAL1 and the REV-ERB-α and REV-ERB-β genomic regulatory circuits than was previously suspected. Genes within the intersection of the BMAL1, REV-ERB-α and REV-ERB-β cistromes are highly enriched for both clock and metabolic functions. As predicted by the cistromic analysis, dual depletion of Rev-erb-α and Rev-erb-β function by creating double-knockout mice profoundly disrupted circadian expression of core circadian clock and lipid homeostatic gene networks. As a result, double-knockout mice show markedly altered circadian wheel-running behaviour and deregulated lipid metabolism. These data now unite REV-ERB-α and REV-ERB-β with PER, CRY and other components of the principal feedback loop that drives circadian expression and indicate a more integral mechanism for the coordination of circadian rhythm and metabolism.

Indexed as

Energy MetabolismLipid MetabolismAnimalsBiological ClocksCircadian RhythmCryptochromesFeedback, PhysiologicalGene Expression RegulationGene Regulatory NetworksHomeostasisLiverMaleMiceMice, Inbred C57BLMice, KnockoutMolecular Sequence DataCryptochromesNr1d1 protein, mouseNr1d2 protein, mouseNuclear Receptor Subfamily 1, Group D, Member 1Period Circadian ProteinsReceptors, Cytoplasmic and NuclearRepressor Proteins

Identifiers

PMID22460952
PMCPMC3367514
OpenAlexW2011072921

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.