Evidence map›Paper›PMID 22458920›Full record

ArticleInsect molecular biology2012

Sindbis virus induces the production of a novel class of endogenous siRNAs in Aedes aegypti mosquitoes.

Z N Adelman, M A E Anderson, M Liu, L Zhang, K M Myles

Abstract read
In one paragraph

Article in Insect molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Extending and Running the Mosquito Small RNA Genomics Resource Pipeline.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. RNA interference-mediated antiviral defense in insects.Current opinion in insect science · 2015
    Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Z N AdelmanFralin Life Science Institute and Department of Entomology, Virginia Tech, Blacksburg, VA 24061, USA. zachadel@vt.edu
M A E Anderson
M Liu
L Zhang
K M Myles
Virginia Tech · USLife Science Institute · JP

Funding

Modulation of arboviruses in mosquitoesR01AI077726 · NIAID · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI MYLES, KEVIN M · 2008 to 2012
$1.9M
Antiviral Pathways in Disease Vector MosquitoesR01AI085091 · NIAID · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI ADELMAN, ZACH N. · 2010 to 2014
$1.9M
NIAID NIH HHS AI077726NIAID NIH HHS AI085091NIAID NIH HHS R01 AI077726NIAID NIH HHS R01 AI085091
6 · The paper itself

Abstract

Small RNA regulatory pathways are used to control the activity of transposons, regulate gene expression and resist infecting viruses. We examined the biogenesis of mRNA-derived endogenous short-interfering RNAs (endo-siRNAs) in the disease vector mosquito Aedes aegypti. Under standard conditions, mRNA-derived endo-siRNAs were produced from the bidirectional transcription of tail-tail overlapping gene pairs. Upon infection with the alphavirus, Sindbis virus (SINV), another class of mRNA-derived endo-siRNAs was observed. Genes producing SINV-induced endo-siRNAs were not enriched for overlapping partners or nearby genes, but were enriched for transcripts with long 3' untranslated regions. Endo-siRNAs from this class derived uniformly from the entire length of the target transcript, and were found to regulate the transcript levels of the genes from which they were derived. Strand-specific quantitative PCR experiments demonstrated that antisense strands of targeted mRNA genes were produced to exonic, but not intronic regions. Finally, small RNAs mapped to both sense and antisense strands of exon-exon junctions, suggesting double-stranded RNA precursors to SINV-induced endo-siRNAs may be synthesized from mature mRNA templates. These results suggest additional complexity in small RNA pathways and gene regulation in the presence of an infecting virus in disease vector mosquitoes.

Indexed as

3' Untranslated RegionsAedesAlphavirus InfectionsAnimalsExonsFemaleGene Expression RegulationGenes, InsectGenome, ViralRNA, AntisenseRNA, Double-StrandedRNA InterferenceRNA, MessengerRNA, Small InterferingRNA SplicingSindbis Virus3' Untranslated RegionsRNA, AntisenseRNA, Double-StrandedRNA, MessengerRNA, Small Interfering

Identifiers

PMID22458920
PMCPMC3386798
OpenAlexW2145970005

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.