Evidence map›Paper›PMID 22458599›Full record

ArticleJournal of neurochemistry2012

Pcp4l1 contains an auto-inhibitory element that prevents its IQ motif from binding to calmodulin.

Marc A J Morgan, James I Morgan

Open access · bronzeAbstract read
In one paragraph

Article in Journal of neurochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Lactate as a Metabolite and a Regulator in the Central Nervous System.International journal of molecular sciences · 2016
    Review
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Marc A J MorganSir William Dunn School of Pathology, University of Oxford, Oxford, UK. jim.morgan@stjude.org
James I Morgan
St. Jude Children's Research Hospital · USUniversity of Oxford · GB

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
Characterizing novel adult neuronal survival factorsR01NS042828 · NINDS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI MORGAN, JAMES I · 2005 to 2009
$1.7M
Mechanisms of Cell Death in the Nervous SystemR01NS040361 · NINDS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI MORGAN, JAMES I · 2001 to 2004
$1.2M
NCI NIH HHS CA 21765NCI NIH HHS P30 CA021765NINDS NIH HHS NS040361NINDS NIH HHS NS042828NINDS NIH HHS R01 NS040361NINDS NIH HHS R01 NS042828
6 · The paper itself

Abstract

Purkinje cell protein 4-like 1 (Pcp4l1) is a small neuronal IQ motif protein closely related to the calmodulin-binding protein Pcp4/PEP-19. PEP-19 interacts with calmodulin via its IQ motif to inhibit calmodulin-dependent enzymes and we hypothesized Pcp4l1 would have similar properties. Surprisingly, full-length Pcp4l1 does not interact with calmodulin in yeast two-hybrid or pulldown experiments yet a synthetic peptide constituting only the IQ motif of Pcp4l1 binds calmodulin and inhibits calmodulin-dependent kinase II. A nine-residue glutamic acid-rich sequence in Pcp4l1 confers these unexpected properties. This element lies outside the IQ motif and its deletion or exchange with the homologous region of PEP-19 restores calmodulin binding. Conversion of a single isoleucine (Ile36) within this motif to phenylalanine, the residue present in PEP-19, imparts calmodulin binding onto Pcp4l1. Moreover, only aromatic amino acid substitutions at position 36 in Pcp4l1 allow binding. Thus, despite their sequence similarities PEP-19 and Pcp4l1 have distinct properties with the latter harboring an element that can functionally suppress an IQ motif. We speculate Pcp4l1 may be a latent calmodulin inhibitor regulated by post-translational modification and/or co-factor interactions.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsBlotting, WesternCalmodulinCalmodulin-Binding ProteinsMiceMolecular Sequence DataMutagenesis, Site-DirectedNerve Tissue ProteinsProtein BindingReverse Transcriptase Polymerase Chain ReactionSequence AlignmentTransfectionTwo-Hybrid System TechniquesCalmodulinCalmodulin-Binding ProteinsNerve Tissue ProteinsPcp4l1 protein, mouse

Identifiers

PMID22458599
PMCPMC3371134
OpenAlexW1575806339

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.