Evidence map›Paper›PMID 22457617›Full record

ArticlePLoS pathogens2012

Comparative genomics of the apicomplexan parasites Toxoplasma gondii and Neospora caninum: Coccidia differing in host range and transmission strategy.

Adam James Reid, Sarah J Vermont, James A Cotton, David Harris, Grant A Hill-Cawthorne, Stephanie Könen-Waisman, Sophia M Latham, Tobias Mourier, Rebecca Norton, Michael A Quail and 13 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in PLoS pathogens, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 128 papers.

0numbers the graph read from it
0cells of the map it votes in
128citing papers in PubMed
15.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

128 citing papers in PubMed, 234 citations in OpenAlex.

  1. Article
  2. TheMicroorganisms · 2026
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  7. Comparative genomic analysis of fiveMicrobial genomics · 2025
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  8. Molecular characterization ofRoyal Society open science · 2025
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  9. Proceedings of the National Academy of Sciences of the United States of America · 2025
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  11. Upregulated small GTPase immunity-associated proteins confer resistance toFrontiers in cellular and infection microbiology · 2025
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  12. HParasitology research · 2024
    Review
  13. Article
  14. Article
  15. Evaluation of species-specific polyclonal antibodies to detect and differentiate betweenJournal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2024
    Article
  16. TaqMan-quantitative PCR assays applied inFrontiers in cellular and infection microbiology · 2024
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  17. Review
  18. Article
  19. Massive invasion of organellar DNA drives nuclear genome evolution inProceedings of the National Academy of Sciences of the United States of America · 2023
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  20. Article

68 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 9 institutions in 6 countries.

Adam James ReidWellcome Trust Sanger Institute, Hinxton, Cambridgshire, United Kingdom.
Sarah J Vermont
James A Cotton
David Harris
Grant A Hill-Cawthorne
Stephanie Könen-Waisman
Sophia M Latham
Tobias Mourier
Rebecca Norton
Michael A Quail
Mandy Sanders
Dhanasekaran Shanmugam
Amandeep Sohal
James D Wasmuth
Brian Brunk
Michael E Grigg
Jonathan C Howard
John Parkinson
David S Roos
Alexander J Trees
Matthew Berriman
Arnab Pain
Jonathan M Wastling
Wellcome Sanger Institute · GBUniversity of Liverpool · GBUniversity of Pennsylvania · USKing Abdullah University of Science and Technology · SAUniversity of Cologne · DENational Institute of Allergy and Infectious Diseases · USNatural History Museum Aarhus · DKSickKids Foundation · CAUniversity of Toronto · CA

Funding

Toxoplasma Population GeneticsZIAAI001018 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI GRIGG, MICHAEL · 2009 to 2025
$11.3M
Toxoplasma Surface Antigens and ImmunityZIAAI001017 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI GRIGG, MICHAEL · 2009 to 2025
$9.9M
Biotechnology and Biological Sciences Research Council BBS/B/08493CIHRWellcome TrustWellcome Trust 085775/Z/08/Z
6 · The paper itself

Abstract

Toxoplasma gondii is a zoonotic protozoan parasite which infects nearly one third of the human population and is found in an extraordinary range of vertebrate hosts. Its epidemiology depends heavily on horizontal transmission, especially between rodents and its definitive host, the cat. Neospora caninum is a recently discovered close relative of Toxoplasma, whose definitive host is the dog. Both species are tissue-dwelling Coccidia and members of the phylum Apicomplexa; they share many common features, but Neospora neither infects humans nor shares the same wide host range as Toxoplasma, rather it shows a striking preference for highly efficient vertical transmission in cattle. These species therefore provide a remarkable opportunity to investigate mechanisms of host restriction, transmission strategies, virulence and zoonotic potential. We sequenced the genome of N. caninum and transcriptomes of the invasive stage of both species, undertaking an extensive comparative genomics and transcriptomics analysis. We estimate that these organisms diverged from their common ancestor around 28 million years ago and find that both genomes and gene expression are remarkably conserved. However, in N. caninum we identified an unexpected expansion of surface antigen gene families and the divergence of secreted virulence factors, including rhoptry kinases. Specifically we show that the rhoptry kinase ROP18 is pseudogenised in N. caninum and that, as a possible consequence, Neospora is unable to phosphorylate host immunity-related GTPases, as Toxoplasma does. This defense strategy is thought to be key to virulence in Toxoplasma. We conclude that the ecological niches occupied by these species are influenced by a relatively small number of gene products which operate at the host-parasite interface and that the dominance of vertical transmission in N. caninum may be associated with the evolution of reduced virulence in this species.

Indexed as

GenomicsAnimalsCoccidiosisComparative Genomic HybridizationGene Expression RegulationHost-Parasite InteractionsInfectious Disease Transmission, VerticalNeosporaToxoplasmaToxoplasmosisVirulenceZoonoses

Identifiers

PMID22457617
PMCPMC3310773
OpenAlexW2114671362

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.