Evidence map›Paper›PMID 22454269›Full record

ReviewNeurology2012

Fixing the broken system of genetic locus symbols: Parkinson disease and dystonia as examples.

Connie Marras, Katja Lohmann, Anthony Lang, Christine Klein

Abstract readReview
In one paragraph

Review in Neurology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. 'What's in a Name?' Naming Genetically Determined Movement Disorders: Gap and Controversy.Movement disorders : official journal of the Movement Disorder Society · 2026
    Review
  2. Article
  3. Review
  4. Dystonia updates: definition, nomenclature, clinical classification, and etiology.Journal of neural transmission (Vienna, Austria : 1996) · 2021
    Review
  5. The Importance ofCells · 2021
    Review
  6. Review
  7. Review
  8. Naming Genes for Dystonia: DYT-z or Ditzy?Tremor and other hyperkinetic movements (New York, N.Y.) · 2019
    Article
  9. Review
  10. Review
  11. Update on the Genetics of Dystonia.Current neurology and neuroscience reports · 2017
    Review
  12. The genetics of primary familial brain calcifications.Current neurology and neuroscience reports · 2014
    Review
  13. Time to redefine PD? Introductory statement of the MDS Task Force on the definition of Parkinson's disease.Movement disorders : official journal of the Movement Disorder Society · 2014
    Review
  14. Article
  15. Primary dystonia: moribund or viable.Movement disorders : official journal of the Movement Disorder Society · 2013
    Review
  16. Phenomenology and classification of dystonia: a consensus update.Movement disorders : official journal of the Movement Disorder Society · 2013
    Review
  17. Article
  18. [Genetics of movement disorders].Der Nervenarzt · 2013
    Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Connie MarrasToronto Western Hospital Morton and Gloria Shulman Movement Disorders Centre and the Edmond J. Safra Program in Parkinson’s Disease, University of Toronto, Toronto, Canada. cmarras@uhnresearch.ca
Katja Lohmann
Anthony Lang
Christine Klein

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Originally, locus symbols (e.g., DYT1) were introduced to specify chromosomal regions that had been linked to a familial disorder with a yet unknown gene. Symbols were systematically assigned in a numerical series to designate mapped loci for a specific phenotype or group of phenotypes. Since the system of designating and using locus symbols was originally established, both our knowledge and our techniques of gene discovery have evolved substantially. The current system has problems that are sources of confusion, perpetuate misinformation, and misrepresent the system as a useful reference tool for a list of inherited disorders of a particular phenotypic class. These include erroneously assigned loci, duplicated loci, missing symbols, missing loci, unconfirmed loci in a consecutively numbered system, combining causative genes and risk factor genes in the same list, and discordance between phenotype and list assignment. In this article, we describe these problems and their impact, and propose solutions. The system could be significantly improved by creating distinct lists for clinical and research purposes, creating more informative locus symbols, distinguishing disease-causing mutations from risk factors, raising the threshold of evidence prior to assigning a locus symbol, paying strict attention to the predominant phenotype when assigning symbols lists, and having a formal system for reviewing and continually revising the list that includes input from both clinical and genetics experts.

Indexed as

Chromosome MappingDystoniaDystonic DisordersGenetic LinkageGenetic LociHumansParkinson Disease

Identifiers

PMID22454269
PMCPMC3310311

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.