Evidence map›Paper›PMID 22454144›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2012

Molecular mapping of qualitative and quantitative loci for resistance to Leptosphaeria maculans causing blackleg disease in canola (Brassica napus L.).

Rosy Raman, Belinda Taylor, Steve Marcroft, Jiri Stiller, Paul Eckermann, Neil Coombes, Ata Rehman, Kurt Lindbeck, David Luckett, Neil Wratten and 4 more

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
9.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 101 citations in OpenAlex.

  1. Current issues in molecular biology · 2023
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  2. Identification of candidate genes forFrontiers in plant science · 2023
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  12. Article
  13. TheFrontiers in plant science · 2021
    Article
  14. Review
  15. Genetic Analysis of a Horizontal Resistance LocusFrontiers in plant science · 2021
    Article
  16. Recent Findings Unravel Genes and Genetic Factors UnderlyingInternational journal of molecular sciences · 2020
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Rosy RamanEH Graham Centre for Agricultural Innovation, NSW Department of Primary Industries and Charles Sturt University, Wagga Wagga Agricultural Institute, PMB, Wagga Wagga, NSW 2650, Australia.
Belinda Taylor
Steve Marcroft
Jiri Stiller
Paul Eckermann
Neil Coombes
Ata Rehman
Kurt Lindbeck
David Luckett
Neil Wratten
Jacqueline Batley
David Edwards
Xiaowu Wang
Harsh Raman
Charles Sturt University · AUAgriculture and Food · AUGrains Research and Development Corporation · AUInstitute of Vegetables and Flowers · CNThe University of Adelaide · AUThe University of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Blackleg, caused by Leptosphaeria maculans, is one of the most important diseases of oilseed and vegetable crucifiers worldwide. The present study describes (1) the construction of a genetic linkage map, comprising 255 markers, based upon simple sequence repeats (SSR), sequence-related amplified polymorphism, sequence tagged sites, and EST-SSRs and (2) the localization of qualitative (race-specific) and quantitative (race non-specific) trait loci controlling blackleg resistance in a doubled-haploid population derived from the Australian canola (Brassica napus L.) cultivars Skipton and Ag-Spectrum using the whole-genome average interval mapping approach. Marker regression analyses revealed that at least 14 genomic regions with LOD ≥ 2.0 were associated with qualitative and quantitative blackleg resistance, explaining 4.6-88.9 % of genotypic variation. A major qualitative locus, designated RlmSkipton (Rlm4), was mapped on chromosome A7, within 0.8 cM of the SSR marker Xbrms075. Alignment of the molecular markers underlying this QTL region with the genome sequence data of B. rapa L. suggests that RlmSkipton is located approximately 80 kb from the Xbrms075 locus. Molecular marker-RlmSkipton linkage was further validated in an F(2) population from Skipton/Ag-Spectrum. Our results show that SSR markers linked to consistent genomic regions are suitable for enrichment of favourable alleles for blackleg resistance in canola breeding programs.

Indexed as

AllelesAscomycotaBrassica napusChromosome MappingChromosomes, PlantDisease ResistanceGenes, PlantGenetic LinkageGenetic LociPhenotypePlant DiseasesPolymorphism, GeneticQuantitative Trait LociReproducibility of Results

Identifiers

PMID22454144
OpenAlexW2006673028

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.