Evidence map›Paper›PMID 22451940›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Interaction with plant transcription factors can mediate nuclear import of phytochrome B.

Anne Pfeiffer, Marie-Kristin Nagel, Claudia Popp, Florian Wüst, János Bindics, András Viczián, Andreas Hiltbrunner, Ferenc Nagy, Tim Kunkel, Eberhard Schäfer

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 87 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Participation of miR165a in the Phytochrome Signal Transduction in Maize (International journal of molecular sciences · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Phytochrome Signaling Networks.Annual review of plant biology · 2021
    Review
  16. Review
  17. Review
  18. Plant communications · 2020
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Anne PfeifferPlant Physiology, Faculty of Biology, University of Freiburg, D-79104 Freiburg, Germany. pfeiffer@berkeley.edu
Marie-Kristin Nagel
Claudia Popp
Florian Wüst
János Bindics
András Viczián
Andreas Hiltbrunner
Ferenc Nagy
Tim Kunkel
Eberhard Schäfer
Institute of Plant Biology · HUUniversity of Edinburgh · GBUniversity of Freiburg · DEUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phytochromes (phy) are red/far-red-absorbing photoreceptors that regulate the adaption of plant growth and development to changes in ambient light conditions. The nuclear transport of the phytochromes upon light activation is regarded as a key step in phytochrome signaling. Although nuclear import of phyA is regulated by the transport facilitators far red elongated hypocotyl 1 (FHY1) and fhy1-like, an intrinsic nuclear localization signal was proposed to be involved in the nuclear accumulation of phyB. We recently showed that nuclear import of phytochromes can be analyzed in a cell-free system consisting of isolated nuclei of the unicellular green algae Acetabularia acetabulum. We now show that this system is also versatile to elucidate the mechanism of the nuclear transport of phyB. We tested the nuclear transport characteristics of full-length phyB as well as N- and C-terminal phyB fragments in vitro and showed that the nuclear import of phyB can be facilitated by phytochrome-interacting factor 3 (PIF3). In vivo measurements of phyB nuclear accumulation in the absence of PIF1, -3, -4, and -5 indicate that these PIFs are the major transport facilitators during the first hours of deetiolation. Under prolonged irradiations additional factors might be responsible for phyB nuclear transport in the plant.

Indexed as

AcetabulariaActive Transport, Cell NucleusArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsCell NucleusNuclear Localization SignalsPhytochrome BProtein BindingRecombinant Fusion ProteinsArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsNuclear Localization SignalsPHYB protein, ArabidopsisPhytochrome BPIF3 protein, ArabidopsisRecombinant Fusion Proteins

Identifiers

PMID22451940
PMCPMC3326511
OpenAlexW2032832425

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.