Evidence map›Paper›PMID 22447587›Full record

ArticleApplied and environmental microbiology2012

Intramolecular regulation of the sequence-specific mRNA interferase activity of MazF fused to a MazE fragment with a linker cleavable by specific proteases.

Jung-Ho Park, Yoshihiro Yamaguchi, Masayori Inouye

Abstract readEvaluation Study
In one paragraph

Article in Applied and environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jung-Ho ParkDepartment of Biochemistry, Robert Wood Johnson Medical School, Piscataway, NJ, USA.
Yoshihiro Yamaguchi
Masayori Inouye
Johnson University · US

Funding

Deciphering of the Toxin-Antitoxin Systems in E. coliR01GM081567 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI INOUYE, MASAYORI · 2009 to 2012
$1.8M
NIGMS NIH HHS 1R01GM081567NIGMS NIH HHS 3R01GM081567-02S1NIGMS NIH HHS R01 GM081567
6 · The paper itself

Abstract

The genomes of human immunodeficiency virus type 1 (HIV-1) and hepatitis C virus (HCV) consist of single-stranded RNA encoding polyproteins, which are processed to individual functional proteins by virus-encoded specific proteases. These proteases have been used as targets for drug development. Here, instead of targeting these proteases to inhibit viral infection, we utilized the protease activity to activate a toxic protein to prevent viral infection. We engineered the MazE-MazF antitoxin-toxin system of Escherichia coli to fuse a C-terminal 41-residue fragment of antitoxin MazE to the N-terminal end of toxin MazF with a linker having a specific protease cleavage site for either HIV PR (HIV-1 protease), NS3 protease (HCV protease), or factor Xa. These fusion proteins formed a stable dimer (instead of the MazF(2)-MazE(2)-MazF(2) heterohexamer in nature) to inactivate the ACA (sequence)-specific mRNA interferase activity of MazF. When the fusion proteins were incubated with the corresponding proteases, the MazE fragment was cleaved from the fusion proteins, releasing active MazF, which then acted as an ACA-specific mRNA interferase cleaving single-stranded MS2 phage RNA. The intramolecular regulation of MazF toxicity by proteases as demonstrated may provide a novel approach for preventive and therapeutic treatments of infection by HIV-1, HCV, and other single-stranded RNA viruses.

Indexed as

Cross-Linking ReagentsDEAD-box RNA HelicasesDimerizationDNA-Binding ProteinsEndoribonucleasesEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialGenetic EngineeringHepacivirusHIV ProteaseHumansNucleoside-TriphosphataseRecombinant Fusion ProteinsRNA, MessengerSerine EndopeptidasesCross-Linking ReagentsDEAD-box RNA HelicasesDNA-Binding ProteinsEndoribonucleasesEscherichia coli ProteinsHIV ProteaseMazE protein, E coliMazF protein, E coliNS3 protein, hepatitis C virusNucleoside-Triphosphatasep16 protease, Human immunodeficiency virus 1Recombinant Fusion ProteinsRNA, MessengerSerine EndopeptidasesViral Nonstructural ProteinsViral Proteases

Identifiers

PMID22447587
PMCPMC3346410
OpenAlexW2150628373

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.