Evidence map›Paper›PMID 22446930›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2012

A multiple gene complex on rice chromosome 4 is involved in durable resistance to rice blast.

S Fukuoka, R Mizobuchi, N Saka, I Suprun, S Ivan, T Matsumoto, K Okuno, M Yano

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Linkage of SSR markers with rice blast resistance and development of partial resistant advanced lines of rice (Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Improving of Rice Blast Resistances inFrontiers in plant science · 2016
    Article
  15. Functional divergence of duplicated genes results in a novel blast resistance gene Pi50 at the Pi2/9 locus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015
    Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

  • Erratum issued
    Ivan, S [corrected to Suprun, I]
5 · Who and what money

Authors and funding

8 authors at 2 institutions in 3 countries.

S FukuokaNational Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba, Ibaraki, 305-8602, Japan. fukusan@affrc.go.jp
R Mizobuchi
N Saka
I Suprun
S Ivan
T Matsumoto
K Okuno
M Yano
Institute of Agrobiological Sciences · JPRice University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quantitative trait loci (QTLs) for resistance to rice blast offer a potential source of durable disease resistance in rice. However, few QTLs have been validated in progeny testing, on account of their small phenotypic effects. To understand the genetic basis for QTL-mediated resistance to blast, we dissected a resistance QTL, qBR4-2, using advanced backcross progeny derived from a chromosome segment substitution line in which a 30- to 34-Mb region of chromosome 4 from the resistant cultivar Owarihatamochi was substituted into the genetic background of the highly susceptible Aichiasahi. The analysis resolved qBR4-2 into three loci, designated qBR4-2a, qBR4-2b, and qBR4-2c. The sequences of qBR4-2a and qBR4-2b, which lie 181 kb apart from each other and measure, 113 and 32 kb, respectively, appear to encode proteins with a putative nucleotide-binding site (NBS) and leucine-rich repeats (LRRs). Sequence analysis of the donor allele of qBR4-2a, the region with the largest effect among the three, revealed sequence variations in the NBS-LRR region. The effect of qBR4-2c was smallest among the three, but its combination with the donor alleles of qBR4-2a and qBR4-2b significantly enhanced blast resistance. qBR4-2 comprises three tightly linked QTLs that control blast resistance in a complex manner, and thus gene pyramiding or haplotype selection is the recommended strategy for improving QTL-mediated resistance to blast disease through the use of this chromosomal region.

Indexed as

Genes, PlantAllelesChromosome MappingChromosomes, PlantCrosses, GeneticDisease ResistanceGenetic LinkageOryzaPlant DiseasesSequence Analysis, DNA

Identifiers

PMID22446930
PMCPMC3397134
OpenAlexW2046242656

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.