Evidence map›Paper›PMID 22446163›Full record

ArticleBiochimica et biophysica acta2012

Thermal stability of glucokinase (GK) as influenced by the substrate glucose, an allosteric glucokinase activator drug (GKA) and the osmolytes glycerol and urea.

B Zelent, C Buettger, J Grimsby, R Sarabu, J M Vanderkooi, A J Wand, F M Matschinsky

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

B ZelentDepartment of Biochemistry and Biophysics and Diabetes Research Center, University of Pennsylvania, Philadelphia, PA 19104, USA.
C Buettger
J Grimsby
R Sarabu
J M Vanderkooi
A J Wand
F M Matschinsky

Funding

VIRAL VECTOR COREP30DK019525 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI MITCHELL A. LAZAR · 1986 to 2026
$48.3M
METABOLISM OF ISLETS OF LANGERHANS AND HORMONE RELEASER01DK022122 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI MATSCHINSKY, FRANZ M · 1994 to 2011
$5.4M
STRUCTURAL STUDIES OF CALMODULIN-PEPTIDE COMPLEXESR01DK039806 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI WAND, A. JOSHUA · 1988 to 2011
$3.5M
NIDDK NIH HHS P30 DK019525NIDDK NIH HHS R01 DK022122NIDDK NIH HHS R01 DK039806PHS HHS 19525PHS HHS 22122PHS HHS 39086
6 · The paper itself

Abstract

We investigated how glycerol, urea, glucose and a GKA influence kinetics and stability of wild-type and mutant GK. Glycerol and glucose stabilized GK additively. Glycerol barely affected the TF spectra of all GKs but decreased k(cat), glucose S(0.5) and K(D) values and ATP K(M) while leaving cooperativity unchanged. Glycerol sensitized all GKs to GKA as shown by TF. Glucose increased TF of GKs without influence of glycerol on the effect. Glycerol and GKA affected kinetics and binding additively. The activation energies for thermal denaturation of GK were a function of glucose with K(D)s of 3 and 1mM without and with glycerol, respectively. High urea denatured wild type GK reversibly at 20 and 60°C and urea treatment of irreversibly heat denatured GK allowed refolding as demonstrated by TF including glucose response. We concluded: Glycerol stabilizes GK indirectly without changing the folding structure of the apoenzyme, by restructuring the surface water of the protein, whereas glucose stabilizes GK directly by binding to its substrate site and inducing a compact conformation. Glucose or glycerol (alone or combined) is unable to prevent irreversible heat denaturation above 40°C. However, urea denatures GK reversibly even at 60°C by binding to the protein backbone and directly interacting with hydrophobic side chains. It prevents irreversible aggregation allowing complete refolding when urea is removed. This study establishes the foundation for exploring numerous instability mutants among the more than 600 variant GKs causing diabetes in animals and humans.

Indexed as

Adenosine TriphosphateAllosteric RegulationApoenzymesEnzyme ActivatorsEnzyme StabilityEscherichia coliGlucokinaseGlucoseGlycerolHumansKineticsModels, MolecularMutationOsmotic PressureProtein ConformationProtein FoldingAdenosine TriphosphateApoenzymesEnzyme ActivatorsGlucokinaseGlucoseGlycerolRecombinant Fusion ProteinsUreaWater

Identifiers

PMID22446163
PMCPMC4180501

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.