Evidence map›Paper›PMID 22442258›Full record

ArticleMolecular & cellular proteomics : MCP2012

Intercellular variation in signaling through the TGF-β pathway and its relation to cell density and cell cycle phase.

Agata Zieba, Katerina Pardali, Ola Söderberg, Lena Lindbom, Erik Nyström, Aristidis Moustakas, Carl-Henrik Heldin, Ulf Landegren

Abstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Article
  6. Proximity Ligation Assay as a Tool for Antibody Validation in Human Tissues.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2020
    Article
  7. In situ protein detection with enhanced specificity using DNA-conjugated antibodies and proximity ligation.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2018
    Article
  8. Article
  9. Sensing relative signal in the Tgf-β/Smad pathway.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Agata ZiebaDepartment of Immunology, Genetics and Pathology, Uppsala University, Uppsala, Se-75185 Sweden.
Katerina Pardali
Ola Söderberg
Lena Lindbom
Erik Nyström
Aristidis Moustakas
Carl-Henrik Heldin
Ulf Landegren

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fundamental open questions in signal transduction remain concerning the sequence and distribution of molecular signaling events among individual cells. In this work, we have characterized the intercellular variability of transforming growth factor β-induced Smad interactions, providing essential information about TGF-β signaling and its dependence on the density of cell populations and the cell cycle phase. By employing the recently developed in situ proximity ligation assay, we investigated the dynamics of interactions and modifications of Smad proteins and their partners under native and physiological conditions. We analyzed the kinetics of assembly of Smad complexes and the influence of cellular environment and relation to mitosis. We report rapid kinetics of formation of Smad complexes, including native Smad2-Smad3-Smad4 trimeric complexes, in a manner influenced by the rate of proteasomal degradation of these proteins, and we found a striking cell to cell variation of signaling complexes. The single-cell analysis of TGF-β signaling in genetically unmodified cells revealed previously unknown aspects of regulation of this pathway, and it provided a basis for analysis of these signaling events to diagnose pathological perturbations in patient samples and to evaluate their susceptibility to drug treatment.

Indexed as

AnimalsCell CountCell CycleCell LineFibroblastsHumansKineticsMiceMicroscopy, FluorescenceMultiprotein ComplexesOrgan SpecificityProteasome Endopeptidase ComplexProtein BindingProtein IsoformsProteolysisSignal TransductionMultiprotein ComplexesProteasome Endopeptidase ComplexProtein IsoformsSmad ProteinsTransforming Growth Factor beta

Identifiers

PMID22442258
PMCPMC3394940

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.