Evidence map›Paper›PMID 22440734›Full record

ReviewScience translational medicine2012

Merging systems biology with pharmacodynamics.

Ravi Iyengar, Shan Zhao, Seung-Wook Chung, Donald E Mager, James M Gallo

Abstract readReview
In one paragraph

Review in Science translational medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
8.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 153 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. What's next for computational systems biology?Frontiers in systems biology · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Network Pharmacology Deciphering Mechanisms of Volatiles ofEvidence-based complementary and alternative medicine : eCAM · 2019
    Article
  19. Dynamic Targeting in Cancer Treatment.Frontiers in physiology · 2019
    Article
  20. Review

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ravi IyengarDepartment of Pharmacology and Systems Therapeutics, Systems Biology Center New York, Mount Sinai School of Medicine, New York, NY 10029, USA. ravi.iyengar@mssm.edu
Shan Zhao
Seung-Wook Chung
Donald E Mager
James M Gallo
Icahn School of Medicine at Mount Sinai · USUniversity at Buffalo, State University of New York · US

Funding

System Biology Center in New YorkP50GM071558 · NIGMS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI IYENGAR, SRINIVAS RAVI V · 2007 to 2017
$22.8M
MOLECULAR MECHANISM OF DESENSITIZATIONR01GM054508 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI IYENGAR, SRINIVAS RAVI V · 1995 to 2016
$8.0M
Teaching biomedical and pharmacological trainees to produce FAIR data for AI & ML applicationsT32GM062754 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI SCHLESSINGER, AVNER · 2001 to 2023
$6.2M
MATHEMATICAL MODELS IN PHARMACODYNAMICSR01GM057980 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI JUSKO, WILLIAM J., KRZYZANSKI, WOJCIECH · 1998 to 2013
$3.4M
INTERACTIONS BETWEEN CYTOTOXIC AND ANTIANGIOGENIC DRUGSR01CA072937 · NCI · TEMPLE UNIV OF THE COMMONWEALTH · PI GALLO, JAMES M. · 1998 to 2015
$2.3M
Development of Targeted Anticancer DrugsR01CA127963 · NCI · TEMPLE UNIV OF THE COMMONWEALTH · PI GALLO, JAMES M. · 2008 to 2012
$2.0M
NCI NIH HHS CA072937NCI NIH HHS CA127963NCI NIH HHS R01 CA072937NCI NIH HHS R01 CA127963NIGMS NIH HHS GM057980NIGMS NIH HHS GM54508NIGMS NIH HHS P50 GM07155NIGMS NIH HHS P50 GM071558NIGMS NIH HHS R01 GM054508NIGMS NIH HHS R01 GM057980NIGMS NIH HHS T32 GM 062754NIGMS NIH HHS T32 GM062754
6 · The paper itself

Abstract

The emerging discipline of systems pharmacology aims to combine analysis and computational modeling of cellular regulatory networks with quantitative pharmacology approaches to drive the drug discovery processes, predict rare adverse events, and catalyze the practice of personalized precision medicine. Here, we introduce the concept of enhanced pharmacodynamic (ePD) models, which synergistically combine the desirable features of systems biology and current PD models within the framework of ordinary or partial differential equations. ePD models that analyze regulatory networks involved in drug action can account for a drug's multiple targets and for the effects of genomic, epigenomic, and posttranslational changes on the drug efficacy. This new knowledge can drive drug discovery and shape precision medicine.

Indexed as

PharmacologySystems BiologyDecision MakingModels, Theoretical

Identifiers

PMID22440734
PMCPMC3405973
OpenAlexW2109477330

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.