Evidence map›Paper›PMID 22439002›Full record

ArticlePloS one2012

Expression and characterization of Drosophila signal peptide peptidase-like (sppL), a gene that encodes an intramembrane protease.

David J Casso, Songmei Liu, Brian Biehs, Thomas B Kornberg

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Genome-Wide Identification of the SPP/SPPL Gene Family andInternational journal of molecular sciences · 2024
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

David J CassoDepartment of Biochemistry and Biophysics, University of California San Francisco, San Francisco, California, United States of America.
Songmei Liu
Brian Biehs
Thomas B Kornberg
University of California, San Francisco · US

Funding

HEDGEHOG SIGNALING IN DEVELOPMENT AND DISEASER01GM077407 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KORNBERG, THOMAS B. · 2006 to 2009
$1.1M
NIGMS NIH HHS #GM077407NIGMS NIH HHS R01 GM077407
6 · The paper itself

Abstract

Intramembrane proteases of the Signal Peptide Peptidase (SPP) family play important roles in developmental, metabolic and signaling pathways. Although vertebrates have one SPP and four SPP-like (SPPL) genes, we found that insect genomes encode one Spp and one SppL. Characterization of the Drosophila sppL gene revealed that the predicted SppL protein is a highly conserved structural homolog of the vertebrate SPPL3 proteases, with a predicted nine-transmembrane topology, an active site containing aspartyl residues within a transmembrane region, and a carboxy-terminal PAL domain. SppL protein localized to both the Golgi and ER. Whereas spp is an essential gene that is required during early larval stages and whereas spp loss-of-function reduced the unfolded protein response (UPR), sppL loss of function had no apparent phenotype. This was unexpected given that genetic knockdown phenotypes in other organisms suggested significant roles for Spp-related proteases.

Indexed as

Genes, InsectAmino Acid SequenceAnimalsAnimals, Genetically ModifiedAspartic Acid EndopeptidasesBase SequenceCatalytic DomainCloning, MolecularDNA, ComplementaryDrosophila melanogasterDrosophila ProteinsGene Expression Regulation, DevelopmentalGene Expression Regulation, EnzymologicHumansMolecular Sequence DataMutationAspartic Acid EndopeptidasesDNA, ComplementaryDrosophila Proteinssignal peptide peptidaseSppL protein, Drosophila

Identifiers

PMID22439002
PMCPMC3306293
OpenAlexW2028411439

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.