Evidence map›Paper›PMID 22438884›Full record

ArticlePloS one2012

African ancestry and its correlation to type 2 diabetes in African Americans: a genetic admixture analysis in three U.S. population cohorts.

Ching-Yu Cheng, David Reich, Christopher A Haiman, Arti Tandon, Nick Patterson, Elizabeth Selvin, Selvin Elizabeth, Ermeg L Akylbekova, Frederick L Brancati, Josef Coresh and 6 more

Erratum issuedOpen access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 51 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 2 pooled it
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 2 syntheses or guidelines pooled it, 99 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Article
  5. Review
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  13. Article
  14. Genetics of type 2 diabetes mellitus in Indian and Global Population: A Review.The Egyptian journal of medical human genetics · 2022
    Review
  15. Review
  16. Article
  17. Review
  18. Leveraging genetic ancestry to study health disparities.American journal of physical anthropology · 2021
    Article
  19. Observational
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
    Elizabeth, Selvin [corrected to Selvin, Elizabeth]
5 · Who and what money

Authors and funding

16 authors at 10 institutions in 2 countries.

Ching-Yu ChengDepartment of Epidemiology, Johns Hopkins University, Baltimore, Maryland, United States of America.
David Reich
Christopher A Haiman
Arti Tandon
Nick Patterson
Elizabeth Selvin
Selvin Elizabeth
Ermeg L Akylbekova
Frederick L Brancati
Josef Coresh
Eric Boerwinkle
David Altshuler
Herman A Taylor
Brian E Henderson
James G Wilson
W H Linda Kao
Johns Hopkins University · USBroad Institute · USHarvard University · USUniversity of Southern California · USJackson State University · USJohns Hopkins Medicine · USSingapore Eye Research Institute · SGThe University of Texas Health Science Center at Houston · USTougaloo College · USUniversity of Mississippi Medical Center · US

Funding

GENETIC SUSCEPTIBILITY TO CANCER IN MULTIETHNIC COHORTSR01CA063464 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HENDERSON, BRIAN E · 2001 to 2005
$23.2M
Multiethnic Cohort Study of Diet and CancerR37CA054281 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI KOLONEL, LAURENCE N. · 2003 to 2012
$23.2M
Diabetes Research and Training CenterP60DK079637 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI WONDISFORD, FREDRIC E. · 2008 to 2012
$9.1M
JACKSON HEART STUDY--EXAM CENTERN01HC095171 · HC · UNIVERSITY OF MISSISSIPPI MEDICAL CENTER · PI JONES, DANIEL W · 1999 to 2001
$4.6M
MULTIETHNIC/MINORITY COHORT STUDY OF DIET AND CANCERR01CA054281 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI KOLONEL, LAURENCE N. · 1993 to 2002
$4.5M
Health Disparities and CVD: Admixture Mapping in the Jackson Heart StudyR01HL084107 · NHLBI · UNIVERSITY OF MISSISSIPPI MED CTR · PI WILSON, JAMES GRAHAM · 2006 to 2010
$2.9M
GENOTYPING FOR LOCATING HUMAN DISEASE GENESN01HG065403 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID L · 1996 to 2000
$1.7M
COMMUNITY AND COHORT SURVEILLANCE PROGRAMS-N01HC55015N01HC055015 · HC · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI CHAMBLESS, LLOYD E · 1985 to 2006
$1.1M
Population structure in whole-genome disease scansU01HG004168 · NHGRI · HARVARD MEDICAL SCHOOL · PI REICH, DAVID E · 2006 to 2008
$991k
GENETIC SUSCEPTIBILITY TO CANCER IN MULTIETHNIC COHORTSU01CA063464 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HENDERSON, BRIAN E · 1996 to 2000
$943k
COMMUNITY AND COHORT SURVEILLANCE PROGRAMN01HC055016 · HC · BAYLOR COLLEGE OF MEDICINE · PI BALLANTYNE, CHRISTIE M · 1985 to 2000
$785k
FIELD CENTER FOR CCSPN01HC055019 · HC · UNIVERSITY OF MINNESOTA TWIN CITIES · PI FOLSOM, AARON R · 1985 to 2000
$748k
NCI NIH HHS CA54281NCI NIH HHS CA63464NCI NIH HHS R01 CA054281NCI NIH HHS R01 CA063464NCI NIH HHS R37 CA054281NCI NIH HHS U01 CA063464NHGRI NIH HHS N01 HG065403NHGRI NIH HHS U01 HG004168NHGRI NIH HHS U01-HG004168NHLBI NIH HHS N01 HC055015NHLBI NIH HHS N01 HC055016NHLBI NIH HHS N01 HC055018NHLBI NIH HHS N01 HC055019NHLBI NIH HHS N01 HC055020NHLBI NIH HHS N01 HC055021NHLBI NIH HHS N01 HC055022NHLBI NIH HHS N01 HC095170NHLBI NIH HHS N01 HC095171NHLBI NIH HHS N01 HC095172NHLBI NIH HHS N01-HC-55015NHLBI NIH HHS N01-HC-55016NHLBI NIH HHS N01-HC-55018NHLBI NIH HHS N01-HC-55019NHLBI NIH HHS N01-HC-55020NHLBI NIH HHS N01-HC-55021NHLBI NIH HHS N01-HC-55022NHLBI NIH HHS N01-HC-95170NHLBI NIH HHS N01-HC-95171NHLBI NIH HHS N01-HC-95172NHLBI NIH HHS N01 HV048195NHLBI NIH HHS N01-HV-48195NHLBI NIH HHS R01 HL084107NHLBI NIH HHS R01-HL-084107NIDDK NIH HHS K01 DK067207NIDDK NIH HHS K01DK067207NIDDK NIH HHS P60 DK079637NIDDK NIH HHS P60DK079637NIDDK NIH HHS R21 DK073482NIDDK NIH HHS R21DK073482
6 · The paper itself

Abstract

The risk of type 2 diabetes is approximately 2-fold higher in African Americans than in European Americans even after adjusting for known environmental risk factors, including socioeconomic status (SES), suggesting that genetic factors may explain some of this population difference in disease risk. However, relatively few genetic studies have examined this hypothesis in a large sample of African Americans with and without diabetes. Therefore, we performed an admixture analysis using 2,189 ancestry-informative markers in 7,021 African Americans (2,373 with type 2 diabetes and 4,648 without) from the Atherosclerosis Risk in Communities Study, the Jackson Heart Study, and the Multiethnic Cohort to 1) determine the association of type 2 diabetes and its related quantitative traits with African ancestry controlling for measures of SES and 2) identify genetic loci for type 2 diabetes through a genome-wide admixture mapping scan. The median percentage of African ancestry of diabetic participants was slightly greater than that of non-diabetic participants (study-adjusted difference = 1.6%, P<0.001). The odds ratio for diabetes comparing participants in the highest vs. lowest tertile of African ancestry was 1.33 (95% confidence interval 1.13-1.55), after adjustment for age, sex, study, body mass index (BMI), and SES. Admixture scans identified two potential loci for diabetes at 12p13.31 (LOD = 4.0) and 13q14.3 (Z score = 4.5, P = 6.6 × 10(-6)). In conclusion, genetic ancestry has a significant association with type 2 diabetes above and beyond its association with non-genetic risk factors for type 2 diabetes in African Americans, but no single gene with a major effect is sufficient to explain a large portion of the observed population difference in risk of diabetes. There undoubtedly is a complex interplay among specific genetic loci and non-genetic factors, which may both be associated with overall admixture, leading to the observed ethnic differences in diabetes risk.

Indexed as

AdultAgedAnimalsBlack or African AmericanCohort StudiesDiabetes Mellitus, Type 2FemaleGenetic MarkersGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansMaleMiddle AgedOdds RatioProspective StudiesQuantitative Trait, HeritableGenetic Markers

Identifiers

PMID22438884
PMCPMC3306373
OpenAlexW2162666754

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.