Evidence map›Paper›PMID 22438863›Full record

ArticlePloS one2012

Amyloid-like fibril formation by polyQ proteins: a critical balance between the polyQ length and the constraints imposed by the host protein.

Natacha Scarafone, Coralie Pain, Anthony Fratamico, Gilles Gaspard, Nursel Yilmaz, Patrice Filée, Moreno Galleni, André Matagne, Mireille Dumoulin

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Equilibrium partially folded states of B. licheniformisEuropean biophysics journal : EBJ · 2019
    Article
  5. Necroptosis: MLKL Polymerization.Journal of nature and science · 2018
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Conformational stability of the RNP domain controls fibril formation of PABPN1.Protein science : a publication of the Protein Society · 2015
    Article
  11. What makes a protein sequence a prion?PLoS computational biology · 2015
    Article
  12. Article
  13. Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Natacha ScarafoneLaboratory of Enzymology and Protein Folding, Centre for Protein Engineering, Institute of Chemistry, University of Liège, Liège, Belgium.
Coralie Pain
Anthony Fratamico
Gilles Gaspard
Nursel Yilmaz
Patrice Filée
Moreno Galleni
André Matagne
Mireille Dumoulin

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nine neurodegenerative disorders, called polyglutamine (polyQ) diseases, are characterized by the formation of intranuclear amyloid-like aggregates by nine proteins containing a polyQ tract above a threshold length. These insoluble aggregates and/or some of their soluble precursors are thought to play a role in the pathogenesis. The mechanism by which polyQ expansions trigger the aggregation of the relevant proteins remains, however, unclear. In this work, polyQ tracts of different lengths were inserted into a solvent-exposed loop of the β-lactamase BlaP and the effects of these insertions on the properties of BlaP were investigated by a range of biophysical techniques. The insertion of up to 79 glutamines does not modify the structure of BlaP; it does, however, significantly destabilize the enzyme. The extent of destabilization is largely independent of the polyQ length, allowing us to study independently the effects intrinsic to the polyQ length and those related to the structural integrity of BlaP on the aggregating properties of the chimeras. Only chimeras with 55Q and 79Q readily form amyloid-like fibrils; therefore, similarly to the proteins associated with diseases, there is a threshold number of glutamines above which the chimeras aggregate into amyloid-like fibrils. Most importantly, the chimera containing 79Q forms amyloid-like fibrils at the same rate whether BlaP is folded or not, whereas the 55Q chimera aggregates into amyloid-like fibrils only if BlaP is unfolded. The threshold value for amyloid-like fibril formation depends, therefore, on the structural integrity of the β-lactamase moiety and thus on the steric and/or conformational constraints applied to the polyQ tract. These constraints have, however, no significant effect on the propensity of the 79Q tract to trigger fibril formation. These results suggest that the influence of the protein context on the aggregating properties of polyQ disease-associated proteins could be negligible when the latter contain particularly long polyQ tracts.

Indexed as

Amino Acid SequenceAmyloidBacillusbeta-LactamasesCrystallography, X-RayEnzyme StabilityHumansIn Vitro TechniquesKineticsMicroscopy, Electron, TransmissionModels, MolecularMolecular Sequence DataNeurodegenerative DiseasesPeptidesProtein ConformationProtein DenaturationAmyloidbeta-LactamasesPeptidespolyglutamineRecombinant Fusion Proteins

Identifiers

PMID22438863
PMCPMC3305072

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.