Evidence map›Paper›PMID 22437837›Full record

ArticleThe Journal of biological chemistry2012

Loop diuretic and ion-binding residues revealed by scanning mutagenesis of transmembrane helix 3 (TM3) of Na-K-Cl cotransporter (NKCC1).

Suma Somasekharan, Jessica Tanis, Biff Forbush

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Obesity and Heart Failure: Introducing the Theme.Journal of cardiovascular development and disease · 2026
    Review
  2. Article
  3. Structural bases for NaNature communications · 2024
    Article
  4. Review
  5. Involvement of sodium-glucose cotransporter-1 activities in maintaining oscillatory ClJournal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2024
    Article
  6. Latest Knowledge on the Role of Vitamin D in Hypertension.International journal of molecular sciences · 2023
    Review
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Structure of the human cation-chloride cotransport KCC1 in an outward-open state.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
  20. Molecular characteristics and physiological roles of NaJournal of cellular physiology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Suma SomasekharanDepartment of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut 06520. Electronic address: suma.somasekharan@yale.edu.
Jessica TanisDepartment of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut 06520.
Biff ForbushDepartment of Cellular and Molecular Physiology, Yale University School of Medicine, New Haven, Connecticut 06520.

Funding

Molecular Physiology of the Na-K-Cl CotransporterR01GM083340 · NIGMS · YALE UNIVERSITY · PI FORBUSH, BLISS · 2008 to 2011
$1.6M
NIGMS NIH HHS GM083340NIGMS NIH HHS R01 GM083340
6 · The paper itself

Abstract

The Na-K-Cl cotransporter (NKCC) plays central roles in cellular chloride homeostasis and in epithelial salt transport, but to date little is known about the mechanism by which the transporter moves ions across the membrane. We examined the functional role of transmembrane helix 3 (TM3) in NKCC1 using cysteine- and tryptophan-scanning mutagenesis and analyzed our results in the context of a structural homology model based on an alignment of NKCC1 with other amino acid polyamine organocation superfamily members, AdiC and ApcT. Mutations of residues along one face of TM3 (Tyr-383, Met-382, Ala-379, Asn-376, Ala-375, Phe-372, Gly-369, and Ile-368) had large effects on translocation rate, apparent ion affinities, and loop diuretic affinity, consistent with a proposed role of TM3 in the translocation pathway. The prediction that Met-382 is part of an extracellular gate that closes to form an occluded state is strongly supported by conformational sensitivity of this residue to 2-(trimethylammonium)ethyl methanethiosulfonate, and the bumetanide insensitivity of M382W is consistent with tryptophan blocking entry of bumetanide into the cavity. Substitution effects on residues at the intracellular end of TM3 suggest that this region is also involved in ion coordination and may be part of the translocation pathway in an inward-open conformation. Mutations of predicted pore residues had large effects on binding of bumetanide and furosemide, consistent with the hypothesis that loop diuretic drugs bind within the translocation cavity. The results presented here strongly support predictions of homology models of NKCC1 and demonstrate important roles for TM3 residues in ion translocation and loop diuretic inhibition.

Indexed as

MutagenesisBinding SitesBumetanideDiureticsHEK293 CellsHumansIon TransportMesylatesMutation, MissenseProtein Structure, SecondarySodium-Potassium-Chloride SymportersSolute Carrier Family 12, Member 2Sulfhydryl Reagents(2-(trimethylammonium)ethyl)methanethiosulfonateBumetanideDiureticsMesylatesSLC12A2 protein, humanSodium-Potassium-Chloride SymportersSolute Carrier Family 12, Member 2Sulfhydryl Reagents

Identifiers

PMID22437837
PMCPMC3366785

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.