Evidence map›Paper›PMID 22437536›Full record

ArticleJournal of veterinary science2012

Cloning and characterization of a selenium-independent glutathione peroxidase (HC29) from adult Haemonchus contortus.

Wei Sun, Xiaokai Song, Ruofeng Yan, Lixin Xu, Xiangrui Li

Open access · goldAbstract read
In one paragraph

Article in Journal of veterinary science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Efficacy of essential oils from plants cultivated in the Amazonian Biome against gastrointestinal nematodes in sheep.Journal of parasitic diseases : official organ of the Indian Society for Parasitology · 2018
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Wei SunCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210095, Jiangsu, China.
Xiaokai Song
Ruofeng Yan
Lixin Xu
Xiangrui Li
Nanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The complete coding sequence of Haemonchus (H.) contortus HC29 cDNA was generated by rapid amplification of cDNA ends in combination with PCR using primers targeting the 5'- and 3'-ends of the partial mRNA sequence. The cloned HC29 cDNA was shown to be 1,113 bp in size with an open reading frame of 507 bp, encoding a protein of 168 amino acid with a calculated molecular mass of 18.9 kDa. Amino acid sequence analysis revealed that the cloned HC29 cDNA contained the conserved catalytic triad and dimer interface of selenium-independent glutathione peroxidase (GPX). Alignment of the predicted amino acid sequences demonstrated that the protein shared 44.7~80.4% similarity with GPX homologues in the thioredoxin-like family. Phylogenetic analysis revealed close evolutionary proximity of the GPX sequence to the counterpart sequences. These results suggest that HC29 cDNA is a GPX, a member of the thioredoxin-like family. Alignment of the nucleic acid and amino acid sequences of HC29 with those of the reported selenium-independent GPX of H. contortus showed that HC29 contained different types of spliced leader sequences as well as dimer interface sites, although the active sites of both were identical. Enzymatic analysis of recombinant prokaryotic HC29 protein showed activity for the hydrolysis of H(2)O(2). These findings indicate that HC29 is a selenium-independent GPX of H. contortus.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCloning, MolecularDNA, ComplementaryGlutathione PeroxidaseGoat DiseasesGoatsHaemonchiasisHaemonchusHydrogen PeroxideMolecular Sequence DataPhylogenyRandom Amplified Polymorphic DNA TechniqueRatsRats, Sprague-DawleyDNA, ComplementaryGlutathione PeroxidaseHydrogen PeroxideRNA, Helminthselenium-independent glutathione peroxidase

Identifiers

PMID22437536
PMCPMC3317457
OpenAlexW2051890508

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.