ArticleDatabase : the journal of biological databases and curation2012
The mouse-human anatomy ontology mapping project.
Article in Database : the journal of biological databases and curation, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
12 citing papers in PubMed.
- Bridging mouse and human anatomies; a knowledge-based approach to comparative anatomy for disease model phenotyping.Mammalian genome : official journal of the International Mammalian Genome Society · 2023Review
- Complex overlapping concepts: An effective auditing methodology for families of similarly structured BioPortal ontologies.Journal of biomedical informatics · 2018Article
- Variation in the representation of human anatomy within digital resources: Implications for data integration.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2018Article
- AAV vector-meditated expression of HLA-G reduces injury-induced corneal vascularization, immune cell infiltration, and fibrosis.Scientific reports · 2017Article
- Experiences from the anatomy track in the ontology alignment evaluation initiative.Journal of biomedical semantics · 2017Review
- The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species.Nucleic acids research · 2017Article
- Leveraging Comparative Genomics to Identify and Functionally Characterize Genes Associated with Sperm Phenotypes in Python bivittatus (Burmese Python).Genetics research international · 2016Article
- The gene expression database for mouse development (GXD): putting developmental expression information at your fingertips.Developmental dynamics : an official publication of the American Association of Anatomists · 2014Review
- The ontology of craniofacial development and malformation for translational craniofacial research.American journal of medical genetics. Part C, Seminars in medical genetics · 2013Review
- Preliminary evaluation of the CellFinder literature curation pipeline for gene expression in kidney cells and anatomical parts.Database : the journal of biological databases and curation · 2013Article
- Matching arthropod anatomy ontologies to the Hymenoptera Anatomy Ontology: results from a manual alignment.Database : the journal of biological databases and curation · 2013Article
- BioGPS and GXD: mouse gene expression data-the benefits and challenges of data integration.Mammalian genome : official journal of the International Mammalian Genome Society · 2012Article
Corrections and comments
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Authors and funding
6 authors.
Funding
Abstract
The overall objective of the Mouse-Human Anatomy Project (MHAP) was to facilitate the mapping and harmonization of anatomical terms used for mouse and human models by Mouse Genome Informatics (MGI) and the National Cancer Institute (NCI). The anatomy resources designated for this study were the Adult Mouse Anatomy (MA) ontology and the set of anatomy concepts contained in the NCI Thesaurus (NCIt). Several methods and software tools were identified and evaluated, then used to conduct an in-depth comparative analysis of the anatomy ontologies. Matches between mouse and human anatomy terms were determined and validated, resulting in a highly curated set of mappings between the two ontologies that has been used by other resources. These mappings will enable linking of data from mouse and human. As the anatomy ontologies have been expanded and refined, the mappings have been updated accordingly. Insights are presented into the overall process of comparing and mapping between ontologies, which may prove useful for further comparative analyses and ontology mapping efforts, especially those involving anatomy ontologies. Finally, issues concerning further development of the ontologies, updates to the mapping files, and possible additional applications and significance were considered. DATABASE URL: http://obofoundry.org/cgi-bin/detail.cgi?id=ma2ncit.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.