Evidence map›Paper›PMID 22433859›Full record

Trial reportThe Journal of biological chemistry2012

Identification of function for CD44 intracytoplasmic domain (CD44-ICD): modulation of matrix metalloproteinase 9 (MMP-9) transcription via novel promoter response element.

Karl E Miletti-González, Kyle Murphy, Muthu N Kumaran, Abhilash K Ravindranath, Roman P Wernyj, Swayamjot Kaur, Gregory D Miles, Elaine Lim, Rigel Chan, Marina Chekmareva and 7 more

Open access · hybridAbstract readClinical Trial
In one paragraph

Trial report in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 125 citations in OpenAlex.

  1. Article
  2. Neutrophils in cancer.Nature reviews. Cancer · 2026
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  11. Small extracellular vesicles (sEVs) in pancreatic cancer progression and diagnosis.Journal of controlled release : official journal of the Controlled Release Society · 2025
    Review
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  15. Review
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24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Karl E Miletti-GonzálezDepartment of Obstetrics and Gynecology and Reproductive Sciences, Division of Gynecologic Oncology, University of Medicine and Dentistry of New Jersey/Robert Wood Johnson Medical School, New Brunswick, New Jersey 08901, USA.
Kyle Murphy
Muthu N Kumaran
Abhilash K Ravindranath
Roman P Wernyj
Swayamjot Kaur
Gregory D Miles
Elaine Lim
Rigel Chan
Marina Chekmareva
Debra S Heller
David Foran
Wenjin Chen
Michael Reiss
Elisa V Bandera
Kathleen Scotto
Lorna Rodríguez-Rodríguez
Rutgers Cancer Institute of New JerseyRutgers, The State University of New Jersey · USJohnson University · USRutgers New Jersey Medical School

Funding

TRANSCRIPTIONAL PROFILINGP30CA072720 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI Tracie Saunders · 1997 to 2026
$94.5M
Image Mining for Comparative Analysis of Expression Patterns in Tissue MicroarrayR01LM009239 · NLM · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI FORAN, DAVID J, SALTZ, JOEL H. · 2007 to 2016
$4.5M
A Phase 1 Study to Evaluate Chimeric Antigen Receptor (CAR) T cells Targeting TAG72 in Patients with Recurrent Epithelial Ovarian CancerR01CA266874 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI Saul Priceman, Lorna RODRIGUEZ-RODRIGUEZ · 2022 to 2026
$3.5M
Informatics for Integrative Brain Tumor Whole Slide AnalysisR01LM011119 · NLM · STATE UNIVERSITY NEW YORK STONY BROOK · PI FORAN, DAVID J, SALTZ, JOEL H. · 2011 to 2014
$1.8M
Collaborative Systems for Analyzing Tissue MicroarraysR01CA156386 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI FORAN, DAVID J · 2010 to 2014
$1.7M
Regulation of MDR1 Expression and Drug Resistance by CD44R01CA120429 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI RODRIGUEZ-RODRIGUEZ, LORNA · 2007 to 2011
$1.5M
Obesity in ovarian cancer prognosisK22CA138563 · NCI · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI BANDERA, ELISA V · 2010 to 2012
$605k
NCI NIH HHS K22 CA138563NCI NIH HHS P30 CA072720NCI NIH HHS R01 CA120429NCI NIH HHS R01CA120429NCI NIH HHS R01 CA156386NCI NIH HHS R01CA156386NCI NIH HHS R01 CA266874NLM NIH HHS R01 LM009239NLM NIH HHS R01 LM011119PHS HHS K22A138563
6 · The paper itself

Abstract

CD44 is a multifunctional cell receptor that conveys a cancer phenotype, regulates macrophage inflammatory gene expression and vascular gene activation in proatherogenic environments, and is also a marker of many cancer stem cells. CD44 undergoes sequential proteolytic cleavages that produce an intracytoplasmic domain called CD44-ICD. However, the role of CD44-ICD in cell function is unknown. We take a major step toward the elucidation of the CD44-ICD function by using a CD44-ICD-specific antibody, a modification of a ChIP assay to detect small molecules, and extensive computational analysis. We show that CD44-ICD translocates into the nucleus, where it then binds to a novel DNA consensus sequence in the promoter region of the MMP-9 gene to regulate its expression. We also show that the expression of many other genes that contain this novel response element in their promoters is up- or down-regulated by CD44-ICD. Furthermore, hypoxia-inducible factor-1α (Hif1α)-responsive genes also have the CD44-ICD consensus sequence and respond to CD44-ICD induction under normoxic conditions and therefore independent of Hif1α expression. Additionally, CD44-ICD early responsive genes encode for critical enzymes in the glycolytic pathway, revealing how CD44 could be a gatekeeper of the Warburg effect (aerobic glycolysis) in cancer cells and possibly cancer stem cells. The link of CD44 to metabolism is novel and opens a new area of research not previously considered, particularly in the study of obesity and cancer. In summary, our results finally give a function to the CD44-ICD and will accelerate the study of the regulation of many CD44-dependent genes.

Indexed as

Response ElementsTranscription, GeneticActive Transport, Cell NucleusCell NucleusFemaleGlycolysisHumansHyaluronan ReceptorsMatrix Metalloproteinase 9Neoplasm ProteinsNeoplasmsNeoplastic Stem CellsProtein Structure, TertiaryCD44 protein, humanHyaluronan ReceptorsMatrix Metalloproteinase 9Neoplasm Proteins

Identifiers

PMID22433859
PMCPMC3365933
OpenAlexW2085493674

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.