Evidence map›Paper›PMID 22428045›Full record

ArticlePloS one2012

Expression and regulation of the Escherichia coli O157:H7 effector proteins NleH1 and NleH2.

Ashleigh Holmes, Cecilia S Lindestam Arlehamn, Dai Wang, Tim J Mitchell, Tom J Evans, Andrew J Roe

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Virulence factors of Shiga toxin-producing Escherichia coli and the risk of developing haemolytic uraemic syndrome in Norway, 1992-2013.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Ashleigh HolmesInstitute of Infection, Immunity and Inflammation, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, United Kingdom.
Cecilia S Lindestam Arlehamn
Dai Wang
Tim J Mitchell
Tom J Evans
Andrew J Roe
University of Glasgow · GBMontana State University · US

Funding

Biotechnology and Biological Sciences Research Council BB/G011389/1Biotechnology and Biological Sciences Research Council BB/H023518/1FDA HHS BB/G011389/1FDA HHS BB/H023518/1
6 · The paper itself

Abstract

backgroundE. coli O157 carries two genes encoding the effector proteins NleH1 and NleH2 which are 87% identical. Despite the similarity between the proteins, the promoter regions upstream of the genes encoding the effectors are more divergent suggesting that the actual expression of the genes may be differentially regulated. This was tested by creating reporter fusions and examining their expression in different genetic backgrounds, media and on contact with host cells. The function of the proteins was also tested following transfection into host cells. PRINCIPAL

findingsExpression of both NleH1 and NleH2 was enhanced when cultured under conditions that stimulated expression of the Type Three Secretion System (T3SS) and was influenced by the regulators Ler and GrlA. Maximal expression of NleH1 required 531 bp of the upstream untranslated region but NleH2 required only 113 bp. Interestingly, contact with host cells strongly repressed expression of both NleH1 and NleH2. Following transfection, both proteins produced only minor effects on NF-κB activation when assessed using a NF-κB luciferase reporter assay, a result that is consistent with the recent report demonstrating the dependence on RPS3 for NleH1 modulation of NF-κB. SIGNIFICANCE: This study demonstrates the importance of considering gene regulation when studying bacterial effector proteins. Despite their sequence similarity, NleH1 and NleH2 are expressed differentially and may, therefore, be translocated at distinct times during an infection.

Indexed as

Bacterial Secretion SystemsDNA PrimersEscherichia coli O157Escherichia coli ProteinsGene Expression Regulation, BacterialHEK293 CellsHumansLuciferasesMicroscopy, FluorescencePromoter Regions, GeneticReal-Time Polymerase Chain ReactionTrans-ActivatorsBacterial Secretion SystemsDNA PrimersEscherichia coli ProteinsGrlA protein, E coliLer protein, E coliLuciferasesNleH protein, E coliTrans-Activators

Identifiers

PMID22428045
PMCPMC3299786
OpenAlexW2140732362

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.