Evidence map›Paper›PMID 22427951›Full record

ArticlePloS one2012

PTPN22.6, a dominant negative isoform of PTPN22 and potential biomarker of rheumatoid arthritis.

Hui-Hsin Chang, Tzong-Shyuan Tai, Bing Lu, Christine Iannaccone, Manuela Cernadas, Michael Weinblatt, Nancy Shadick, Shi-Chuen Miaw, I-Cheng Ho

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
  3. Get Spliced: Uniting Alternative Splicing and Arthritis.International journal of molecular sciences · 2024
    Review
  4. Analysis ofDiagnostics (Basel, Switzerland) · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Overexpression of theJournal of immunology (Baltimore, Md. : 1950) · 2021
    Article
  9. Article
  10. Review
  11. Influence ofFrontiers in immunology · 2021
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. PTPN22: the archetypal non-HLA autoimmunity gene.Nature reviews. Rheumatology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Hui-Hsin ChangDivision of Rheumatology, Immunology, and Allergy, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts, United States of America.
Tzong-Shyuan Tai
Bing Lu
Christine Iannaccone
Manuela Cernadas
Michael Weinblatt
Nancy Shadick
Shi-Chuen Miaw
I-Cheng Ho
Brigham and Women's Hospital · USHarvard University · USNational Taiwan University · TW

Funding

Cathepsins in Antigen Presentation and Lung ImmunityR01AI051461 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI CERNADAS, MANUELA · 2003 to 2007
$2.0M
NIAID NIH HHS R01 AI051461
6 · The paper itself

Abstract

PTPN22 is a tyrosine phosphatase and functions as a damper of TCR signals. A C-to-T single nucleotide polymorphism (SNP) located at position 1858 of human PTPN22 cDNA and converting an arginine (R620) to tryptophan (W620) confers the highest risk of rheumatoid arthritis among non-HLA genetic variations that are known to be associated with this disease. The effect of the R-to-W conversion on the phosphatase activity of PTPN22 protein and the impact of the minor T allele of the C1858T SNP on the activation of T cells has remained controversial. In addition, how the overall activity of PTPN22 is regulated and how the R-to-W conversion contributes to rheumatoid arthritis is still poorly understood. Here we report the identification of an alternative splice form of human PTPN22, namely PTPN22.6. It lacks the nearly entire phosphatase domain and can function as a dominant negative isoform of the full length PTPN22. Although conversion of R620 to W620 in the context of PTPN22.1 attenuated T cell activation, expression of the tryptophan variant of PTPN22.6 reciprocally led to hyperactivation of human T cells. More importantly, the level of PTPN22.6 in peripheral blood correlates with disease activity of rheumatoid arthritis. Our data depict a model that can reconcile the conflicting observations on the functional impact of the C1858T SNP and also suggest that PTPN22.6 is a novel biomarker of rheumatoid arthritis.

Indexed as

Models, BiologicalAlternative SplicingArthritis, RheumatoidBiomarkersBlotting, WesternCell Line, TumorDNA, ComplementaryDNA PrimersEnzyme-Linked Immunosorbent AssayHumansImmunoprecipitationLeukocytes, MononuclearLinear ModelsLuciferasesLymphocyte ActivationMutation, MissenseBiomarkersDNA, ComplementaryDNA PrimersLuciferasesProtein IsoformsProtein Tyrosine Phosphatase, Non-Receptor Type 22PTPN22 protein, human

Identifiers

PMID22427951
PMCPMC3299735
OpenAlexW2030232616

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.