Evidence map›Paper›PMID 22426979›Full record

ReviewProtein & cell2012

Genomic basis for light control of plant development.

Jigang Li, William Terzaghi, Xing Wang Deng

Abstract readReview
In one paragraph

Review in Protein & cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Genome-Wide Identification of the TIFY Family inInternational journal of molecular sciences · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Induced Mutation inInternational journal of molecular sciences · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Plant Chromatin Catches the Sun.Frontiers in plant science · 2019
    Review
  13. Article
  14. Article
  15. Review
  16. Using light to improve commercial value.Horticulture research · 2018
    Article
  17. Article
  18. Differential TOR activation and cell proliferation inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jigang LiPeking-Yale Joint Center for Plant Molecular Genetics and Agro-biotechnology, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, 100871, China.
William Terzaghi
Xing Wang Deng

Funding

Analysis of a Light-Regulated Development SwitchR37GM047850 · NIGMS · YALE UNIVERSITY · PI DENG, XING WANG · 2004 to 2013
$5.7M
LIGHT SIGNAL TRANDUCTION IN ARABIDOPSISR01GM047850 · NIGMS · YALE UNIVERSITY · PI WEI, NING · 1996 to 2018
$4.1M
LIGHT SIGNAL TRANSDUCTION IN ARABIDOPSISR29GM047850 · NIGMS · YALE UNIVERSITY · PI DENG, XING WANG · 1992 to 1995
–
NIGMS NIH HHS GM47850
6 · The paper itself

Abstract

Light is one of the key environmental signals regulating plant growth and development. Therefore, understanding the mechanisms by which light controls plant development has long been of great interest to plant biologists. Traditional genetic and molecular approaches have successfully identified key regulatory factors in light signaling, but recent genomic studies have revealed massive reprogramming of plant transcriptomes by light, identified binding sites across the entire genome of several pivotal transcription factors in light signaling, and discovered the involvement of epigenetic regulation in light-regulated gene expression. This review summarizes the key genomic work conducted in the last decade which provides new insights into light control of plant development.

Indexed as

Genome, PlantLightPlant DevelopmentCircadian ClocksEpigenesis, GeneticGene Expression Regulation, PlantGenomicsPlantsSignal TransductionTranscription FactorsTranscriptomeUltraviolet RaysTranscription Factors

Identifiers

PMID22426979
PMCPMC4875414

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.