Evidence map›Paper›PMID 22426537›Full record

ArticleGenes & development2012

The nonhistone, N-terminal tail of an essential, chimeric H2A variant regulates mitotic H3-S10 dephosphorylation.

Xiaoyuan Song, Josephine Bowen, Wei Miao, Yifan Liu, Martin A Gorovsky

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Xiaoyuan SongDepartment of Biology, University of Rochester, Rochester, New York 14627, USA.
Josephine Bowen
Wei Miao
Yifan Liu
Martin A Gorovsky
University of Rochester · USInstitute of Hydrobiology · CNUniversity of California, San Diego · US

Funding

REPEATED GENES: ORGANIZATION, EVOLUTION, AND FUNCTIONR01GM021793 · NIGMS · UNIVERSITY OF ROCHESTER · PI GOROVSKY, MARTIN A · 1985 to 2008
$3.1M
RNAi in DNA Sequence Elimination in TetrahymenaR01GM072752 · NIGMS · UNIVERSITY OF ROCHESTER · PI GOROVSKY, MARTIN A · 2007 to 2010
$1.5M
Polycomb-mediated heterochromatin formation in TetrahymenaR01GM087343 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LIU, YIFAN · 2010 to 2014
$1.4M
NIGMS NIH HHS GM 021793NIGMS NIH HHS GM 072752NIGMS NIH HHS R01 GM021793NIGMS NIH HHS R01 GM072752NIGMS NIH HHS R01 GM087343
6 · The paper itself

Abstract

H2A.Y is an essential, divergent Tetrahymena thermophila histone variant. It has a long nonhistone N terminus that contains leucine-rich repeats (LRR) and an LRR cap domain with similarity to Sds22p, a regulator of yeast protein phosphatase 1 (PP1) activity in the nucleus. In growing cells, H2A.Y is incorporated into micronuclei only during S phase, which occurs immediately after micronuclear mitosis. Depletion of H2A.Y causes prolonged retention of mitosis-associated histone H3-S10 phosphorylation and mitotic abnormalities that mimic S10E mutation. In cells where H2A.Y is depleted, an inducible chimeric gene, in which the H2A.Y N terminus is attached to H2A.X, is shown to regulate micronuclear H3-S10 phosphorylation. H2A.Y can also be specifically coimmunoprecipitated with a Tetrahymena PP1 ortholog (Ppo1p). Taken together, these results argue that the N terminus of H2A.Y functions to regulate H3-S10 dephosphorylation. This striking in vivo case of "cross-talk" between a H2A variant and a specific post-translational modification of another histone demonstrates a novel function for a histone variant.

Indexed as

MitosisProtein Processing, Post-TranslationalAmino Acid SequenceDNA ReplicationGene Knockout TechniquesHistonesMolecular Sequence DataMutant Chimeric ProteinsNucleosomesPhosphorylationPhylogenyProtein Phosphatase 1Protein Structure, Tertiaryras ProteinsSaccharomyces cerevisiae ProteinsTetrahymena thermophilaHistonesMutant Chimeric ProteinsNucleosomesProtein Phosphatase 1RAS2 protein, S cerevisiaeras ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID22426537
PMCPMC3315122
OpenAlexW2158364935

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.