Evidence map›Paper›PMID 22426112›Full record

ArticleNature chemical biology2012

LYP inhibits T-cell activation when dissociated from CSK.

Torkel Vang, Wallace H Liu, Laurence Delacroix, Shuangding Wu, Stefan Vasile, Russell Dahl, Li Yang, Lucia Musumeci, Dana Francis, Johannes Landskron and 8 more

Abstract read
In one paragraph

Article in Nature chemical biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed, 1 pooled it
12.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 1 synthesis or guideline pooled it, 138 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. An autoimmunity-associated allele ofProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Article
  7. An Autoimmunity-associated allele ofbioRxiv : the preprint server for biology · 2025
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. The genetics of Graves' disease.Reviews in endocrine & metabolic disorders · 2024
    Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 4 countries.

Torkel VangInfectious and Inflammatory Disease Center, Sanford-Burnham Medical Research Institute, La Jolla, California, USA.
Wallace H Liu
Laurence Delacroix
Shuangding Wu
Stefan Vasile
Russell Dahl
Li Yang
Lucia Musumeci
Dana Francis
Johannes Landskron
Kjetil Tasken
Michel L Tremblay
Benedicte A Lie
Rebecca Page
Tomas Mustelin
Souad Rahmouni
Robert C Rickert
Lutz Tautz
Sanford Burnham Prebys Medical Discovery Institute · USUniversity of Liège · BEBrown University · USUniversity of Oslo · NOMcGill University · CAOslo University Hospital · NO

Funding

FUNCTION OF CD19 IN B CELL DEVELOPMENT/DIFFERENTIATIONR01AI041649 · NIAID · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI APGAR, JOHN R · 1998 to 2019
$7.0M
Novel Delivery Technology for Potential Drugs for Cervical CancerR21CA132121 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI TAUTZ, LUTZ · 2008 to 2009
$473k
NCI NIH HHS 1R21CA132121NCI NIH HHS R21 CA132121NIAID NIH HHS R01 AI041649
6 · The paper itself

Abstract

Lymphoid tyrosine phosphatase (LYP) and C-terminal Src kinase (CSK) are negative regulators of signaling mediated through the T-cell antigen receptor (TCR) and are thought to act in a cooperative manner when forming a complex. Here we studied the spatiotemporal dynamics of the LYP-CSK complex in T cells. We demonstrate that dissociation of this complex is necessary for recruitment of LYP to the plasma membrane, where it downmodulates TCR signaling. Development of a potent and selective chemical probe of LYP confirmed that LYP inhibits T-cell activation when removed from CSK. Our findings may explain the reduced TCR-mediated signaling associated with a single-nucleotide polymorphism that confers increased risk for certain autoimmune diseases, including type 1 diabetes and rheumatoid arthritis, and results in expression of a mutant LYP that is unable to bind CSK. Our compound also represents a starting point for the development of a LYP-based treatment of autoimmunity.

Indexed as

Lymphocyte ActivationCell MembraneCSK Tyrosine-Protein KinaseDown-RegulationHumansProtein BindingProtein-Tyrosine KinasesProtein Tyrosine Phosphatase, Non-Receptor Type 22Receptors, Antigen, T-CellSignal Transductionsrc-Family KinasesT-LymphocytesCSK protein, humanCSK Tyrosine-Protein KinaseProtein-Tyrosine KinasesProtein Tyrosine Phosphatase, Non-Receptor Type 22PTPN22 protein, humanReceptors, Antigen, T-Cellsrc-Family Kinases

Identifiers

PMID22426112
PMCPMC3329573
OpenAlexW2097736544

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.