Evidence map›Paper›PMID 22423966›Full record

ArticleCell host & microbe2012

Autophagy protein Rubicon mediates phagocytic NADPH oxidase activation in response to microbial infection or TLR stimulation.

Chul-Su Yang, Jong-Soo Lee, Mary Rodgers, Chan-Ki Min, June-Yong Lee, Hee Jin Kim, Kwang-Hoon Lee, Chul-Joong Kim, Byungha Oh, Ebrahim Zandi and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 1 synthesis or guideline pooled it, 155 citations in OpenAlex.

  1. Guideline
  2. Review
  3. Review
  4. Article
  5. Article
  6. Rubicon modulates neuroimmune responses following traumatic brain injury.bioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. ENKD1 attenuates antibacterial immunity by facilitating TRIM21-mediated RUBCN degradation to suppress LC3-associated phagocytosis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Article
  14. Review
  15. Review
  16. Article
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  18. Article
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49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Chul-Su YangDepartment of Molecular Microbiology and Immunology, University of Southern California, Keck School of Medicine, Harlyne J. Norris Cancer Research Tower, Los Angeles, California 90033, USA.
Jong-Soo Lee
Mary Rodgers
Chan-Ki Min
June-Yong Lee
Hee Jin Kim
Kwang-Hoon Lee
Chul-Joong Kim
Byungha Oh
Ebrahim Zandi
Zhenyu Yue
Igor Kramnik
Chengyu Liang
Jae U Jung
University of Southern California · USKorea Advanced Institute of Science and Technology · KRBoston University · USChungnam National University · KRIcahn School of Medicine at Mount Sinai · US

Funding

TRIM mediated host antiviral responses during influenza virus infectionsU19AI083025 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2009 to 2013
$10.0M
ORF36 Viral Kinase as a Transcriptional Regulator of KSHVP01DE019085 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SUN, REN · 2008 to 2012
$6.4M
Role of UVRAG-mediated Autophagy in Tumor SuppressionR01CA140964 · NCI · WISTAR INSTITUTE · PI LIANG, CHENGYU · 2009 to 2025
$5.4M
Molecular Basis of KSHV PathogenesisR01CA082057 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 1999 to 2016
$5.1M
MOLECULAR BASIS FOR HERPESVIRUS SAIMIRI ONCOGENICITYR01CA031363 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 1985 to 2014
$4.9M
Role of viral BCI-2 mediated anti-apoptosis and-autophagyR01AI073099 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2007 to 2017
$4.3M
KSHV RTA: more than viral replicationR01CA115284 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2005 to 2015
$3.1M
When Autophagy Meets PhagocytosisR01HL110609 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2011 to 2015
$2.0M
Cell growth deregulation by KSHV protein.R01CA106156 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2004 to 2008
$1.5M
A novel immune evasion strategy of KSHV K3 and K5R01CA091819 · NCI · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI JUNG, JAE U · 2001 to 2005
$1.5M
Herpesvirus saimiri TIPR01CA109697 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JUNG, JAE U · 2005 to 2009
$1.5M
STUDY OF KSHV REACTIVATION AND PATHOGENESISR01CA086841 · NCI · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI JUNG, JAE U · 2000 to 2003
$1.1M
NCI NIH HHS CA082057NCI NIH HHS CA115284NCI NIH HHS CA140964NCI NIH HHS CA31363NCI NIH HHS R01 CA031363NCI NIH HHS R01 CA082057NCI NIH HHS R01 CA086841NCI NIH HHS R01 CA091819NCI NIH HHS R01 CA106156NCI NIH HHS R01 CA109697NCI NIH HHS R01 CA115284NCI NIH HHS R01 CA140964NHLBI NIH HHS HL110609NHLBI NIH HHS R01 HL110609NIAID NIH HHS AI073099NIAID NIH HHS AI083025NIAID NIH HHS AI083841NIAID NIH HHS R01 AI073099NIAID NIH HHS R21 AI083841NIAID NIH HHS U19 AI083025NIDCR NIH HHS DE019085NIDCR NIH HHS P01 DE019085
6 · The paper itself

Abstract

Phagocytosis and autophagy are two important and related arms of the host's first-line defense against microbial invasion. Rubicon is a RUN domain containing cysteine-rich protein that functions as part of a Beclin-1-Vps34-containing autophagy complex. We report that Rubicon is also an essential, positive regulator of the NADPH oxidase complex. Upon microbial infection or Toll-like-receptor 2 (TLR2) activation, Rubicon interacts with the p22phox subunit of the NADPH oxidase complex, facilitating its phagosomal trafficking to induce a burst of reactive oxygen species (ROS) and inflammatory cytokines. Consequently, ectopic expression or depletion of Rubicon profoundly affected ROS, inflammatory cytokine production, and subsequent antimicrobial activity. Rubicon's actions in autophagy and in the NADPH oxidase complex are functionally and genetically separable, indicating that Rubicon functions in two ancient innate immune machineries, autophagy and phagocytosis, depending on the environmental stimulus. Rubicon may thus be pivotal to generating an optimal intracellular immune response against microbial infection.

Indexed as

AutophagyAnimalsAutophagy-Related ProteinsCells, CulturedCytokinesEnzyme ActivationEnzyme StabilityFemaleGram-Positive Bacterial InfectionsHumansImmunity, InnateIntracellular Signaling Peptides and ProteinsListeria monocytogenesMembrane GlycoproteinsMiceMice, Inbred C57BLAutophagy-Related ProteinsCYBA protein, humanCYBB protein, humanCytokinesIntracellular Signaling Peptides and ProteinsMembrane GlycoproteinsNADPH Oxidase 2NADPH OxidasesReactive Oxygen SpeciesRUBCN protein, humanToll-Like Receptors

Identifiers

PMID22423966
PMCPMC3616771
OpenAlexW2025802982

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.