Evidence map›Paper›PMID 22422400›Full record

ArticleInternational journal of cancer2012

Single nucleotide polymorphisms in the matrix metalloproteinase gene family and the frequency and duration of gastroesophageal reflux disease influence the risk of esophageal adenocarcinoma.

Winson Y Cheung, Rihong Zhai, Penny Bradbury, Jessica Hopkins, Matthew H Kulke, Rebecca S Heist, Kofi Asomaning, Clement Ma, Wei Xu, Zhaoxi Wang and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in International journal of cancer, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 4 pooled it
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 4 syntheses or guidelines pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. The polymorphism MMP1 -1607 (1G>2G) is associated with a significantly increased risk of cancers from a meta-analysis.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2015
    Pooled it
  4. Pooled it
  5. Article
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  9. Review
  10. Interactions Between Genetic Variants and Environmental Factors Affect Risk of Esophageal Adenocarcinoma and Barrett's Esophagus.Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association · 2018
    Article
  11. Early diagnostic potential ofCancer management and research · 2018
    Article
  12. A newly identified susceptibility locus near FOXP1 modifies the association of gastroesophageal reflux with Barrett's esophagus.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2015
    Article
  13. Association between MMP-12-82A/G polymorphism and cancer risk: a meta-analysis.International journal of clinical and experimental medicine · 2015
    Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Winson Y CheungDivision of Medical Oncology, British Columbia Cancer Agency, Vancouver, BC, Canada.
Rihong Zhai
Penny Bradbury
Jessica Hopkins
Matthew H Kulke
Rebecca S Heist
Kofi Asomaning
Clement Ma
Wei Xu
Zhaoxi Wang
Suzanne Hooshmand
Li Su
David C Christiani
Geoffrey Liu
Harvard University · USPrincess Margaret Cancer Centre · CADana-Farber Cancer Institute · USBC Cancer Agency · CAMassachusetts General Hospital · US

Funding

GENETIC SUSCEPTIBILITY TO LUNG CANCERR01CA074386 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI CHRISTIANI, DAVID C · 1997 to 2008
$4.8M
Molecular Epidemiology of Esophageal Cancer PrognosisR01CA109193 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI LIU, GEOFFREY · 2004 to 2008
$1.9M
H.pylori, genes and esophageal adenocarcinomaR03CA110822 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI LIU, GEOFFREY · 2004 to 2005
$175k
CIHRNCI NIH HHS R01 CA074386NCI NIH HHS R01CA074386NCI NIH HHS R01 CA109193NCI NIH HHS R01CA109193NCI NIH HHS R03 CA110822NCI NIH HHS R03CA110822
6 · The paper itself

Abstract

The matrix metalloproteinase (MMP) family of proteins mediates various cellular pathways, including apoptosis and angiogenesis. Polymorphisms of MMP genes are associated with increased esophageal adenocarcinoma (EAC) risk. Gastroesophageal reflux disease (GERD) is an established EAC risk factor. We examined whether MMP polymorphism-EAC risk is modified by GERD. In total, 309 EAC patients and 279 frequency-matched healthy controls underwent MMP1 1G/2G, MMP3 6A/5A, MMP12 -82A/G and MMP12 1082A/G genotyping. Questionnaires collected GERD history. EAC risk was analyzed using logistic regression, adjusted for key covariates and stratified by GERD. Joint effects models explored GERD severity and duration, whereas additional models explored genotype-GERD interactions in EAC risk. We determined that each MMP1 and MMP3 minor (variant) allele was independently associated with increased EAC risk (adjusted odds ratio (AOR) 3.2, 95% confidence interval (CI) 2.0-5.1, p < 0.001 and AOR 1.8, 95% CI 1.1-2.7, p = 0.01, respectively) only among those with GERD but not in GERD-free individuals (all p = nonsignificant). There were significant interactions between the MMP1 variants and the presence of GERD (p = 0.002) and between MMP3 variants and GERD (p = 0.04). There was an equally strong interaction between cumulative GERD severity and MMP1 (p = 0.002). The AOR of each variant allele was 14.9 (95% CI 1.6-136) for individuals with severe GERD, 1.7 (95% CI 1.0-2.7) for mild-moderate GERD and 0.98 (95% CI 0.7-1.4) for those without GERD. This was further reflected in separate analyses of frequency and duration of GERD. In conclusion, MMP1 1G/2G (and possibly MMP3 6A/5A) polymorphisms alter EAC risk differentially for GERD and GERD-free individuals.

Indexed as

AdenocarcinomaAgedAllelesConfidence IntervalsEsophageal NeoplasmsFemaleGastroesophageal RefluxGenetic Predisposition to DiseaseGenotypeHumansLogistic ModelsMaleMatrix MetalloproteinasesMiddle AgedOdds RatioPolymorphism, Single NucleotideMatrix Metalloproteinases

Identifiers

PMID22422400
PMCPMC3908453
OpenAlexW1964039203

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.