Evidence map›Paper›PMID 22419818›Full record

ArticleMolecular biology of the cell2012

Perispeckles are major assembly sites for the exon junction core complex.

Elisabeth Daguenet, Aurélie Baguet, Sébastien Degot, Ute Schmidt, Fabien Alpy, Corinne Wendling, Coralie Spiegelhalter, Pascal Kessler, Marie-Christine Rio, Hervé Le Hir and 2 more

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 64 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Gene regulation through exon junction complex modularity.Nature structural & molecular biology · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
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  12. Article
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  14. Article
  15. Two classes of active transcription sites and their roles in developmental regulation.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  16. NCBP3 positively impacts mRNA biogenesis.Nucleic acids research · 2020
    Article
  17. Review
  18. Widespread remodeling of proteome solubility in response to different protein homeostasis stresses.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Elisabeth DaguenetInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Unité Mixte de Recherche 7104, Centre National de la Recherche Scientifique/U964 Institut National de Santé et de Recherche Médicale/Université de Strasbourg, 67404 Illkirch, France.
Aurélie Baguet
Sébastien Degot
Ute Schmidt
Fabien Alpy
Corinne Wendling
Coralie Spiegelhalter
Pascal Kessler
Marie-Christine Rio
Hervé Le Hir
Edouard Bertrand
Catherine Tomasetto
Université de Strasbourg · FRInstitut de Génétique Moléculaire de Montpellier · FRInstitut de Biologie de l'École Normale Supérieure · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The exon junction complex (EJC) is loaded onto mRNAs as a consequence of splicing and regulates multiple posttranscriptional events. MLN51, Magoh, Y14, and eIF4A3 form a highly stable EJC core, but where this tetrameric complex is assembled in the cell remains unclear. Here we show that EJC factors are enriched in domains that we term perispeckles and are visible as doughnuts around nuclear speckles. Fluorescence resonance energy transfer analyses and EJC assembly mutants show that perispeckles do not store free subunits, but instead are enriched for assembled cores. At the ultrastructural level, perispeckles are distinct from interchromatin granule clusters that may function as storage sites for splicing factors and intermingle with perichromatin fibrils, where nascent RNAs and active RNA Pol II are present. These results support a model in which perispeckles are major assembly sites for the tetrameric EJC core. This subnuclear territory thus represents an intermediate region important for mRNA maturation, between transcription sites and splicing factor reservoirs and assembly sites.

Indexed as

ExonsCell NucleusDEAD-box RNA HelicasesEukaryotic Initiation Factor-4AHeLa CellsHumansMutationNeoplasm ProteinsNuclear ProteinsProtein BindingRNA-Binding ProteinsRNA, MessengerRNA SplicingTransfectionCASC3 protein, humanDEAD-box RNA HelicasesEIF4A3 protein, humanEukaryotic Initiation Factor-4AMAGOH protein, humanNeoplasm ProteinsNuclear ProteinsRBM8A protein, humanRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID22419818
PMCPMC3338441
OpenAlexW2033808435

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.