Evidence map›Paper›PMID 22418843›Full record

ArticleRNA biology2012

Human RioK3 is a novel component of cytoplasmic pre-40S pre-ribosomal particles.

Kamila Baumas, Julien Soudet, Michèle Caizergues-Ferrer, Marlène Faubladier, Yves Henry, Annie Mougin

Open access · hybridAbstract read
In one paragraph

Article in RNA biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 53 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Kamila BaumasCentre National de la Recherche Scientifique; Laboratoire de Biologie Moléculaire Eucaryote, Toulouse, France.
Julien Soudet
Michèle Caizergues-Ferrer
Marlène Faubladier
Yves Henry
Annie Mougin
Université de Toulouse · FRCentre National de la Recherche Scientifique · FRLaboratoire de Biologie Moléculaire des Eucaryotes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Maturation of the 40S ribosomal subunit precursors in mammals mobilizes several non-ribosomal proteins, including the atypical protein kinase RioK2. Here, we have investigated the involvement of another member of the RIO kinase family, RioK3, in human ribosome biogenesis. RioK3 is a cytoplasmic protein that does not seem to shuttle between nucleus and cytoplasm via a Crm1-dependent mechanism as does RioK2 and which sediments with cytoplasmic 40S ribosomal particles in a sucrose gradient. When the small ribosomal subunit biogenesis is impaired by depletion of either rpS15, rpS19 or RioK2, a concomitant decrease in the amount of RioK3 is observed. Surprisingly, we observed a dramatic and specific increase in the levels of RioK3 when the biogenesis of the large ribosomal subunit is impaired. A fraction of RioK3 is associated with the non ribosomal pre-40S particle components hLtv1 and hEnp1 as well as with the 18S-E pre-rRNA indicating that it belongs to a bona fide cytoplasmic pre-40S particle. Finally, RioK3 depletion leads to an increase in the levels of the 21S rRNA precursor in the 18S rRNA production pathway. Altogether, our results strongly suggest that RioK3 is a novel cytoplasmic component of pre-40S pre-ribosomal particle(s) in human cells, required for normal processing of the 21S pre-rRNA.

Indexed as

Amino Acid MotifsAmino Acid SequenceCytoplasmHeLa CellsHumansMolecular Sequence DataProtein BindingProtein Serine-Threonine KinasesRibosome Subunits, Small, EukaryoticRNA PrecursorsRNA, Ribosomal, 18SSequence AlignmentProtein Serine-Threonine KinasesRIO kinase 3, humanRNA PrecursorsRNA, Ribosomal, 18S

Identifiers

PMID22418843
PMCPMC3346313
OpenAlexW1974616287

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.