Evidence map›Paper›PMID 22416906›Full record

ArticleVirology journal2012

Evolution of African cassava mosaic virus by recombination between bipartite and monopartite begomoviruses.

Fidèle Tiendrébéogo, Pierre Lefeuvre, Murielle Hoareau, Mireille A Harimalala, Alexandre De Bruyn, Julie Villemot, Valentin S E Traoré, Gnissa Konaté, Alfred S Traoré, Nicolas Barro and 3 more

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 69 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 4 countries.

Fidèle TiendrébéogoInstitut de l'Environnement et de Recherches Agricoles, Ouagadougou, Burkina Faso.
Pierre Lefeuvre
Murielle Hoareau
Mireille A Harimalala
Alexandre De Bruyn
Julie Villemot
Valentin S E Traoré
Gnissa Konaté
Alfred S Traoré
Nicolas Barro
Bernard Reynaud
Oumar Traoré
Jean-Michel Lett
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRInstitut de l'Environnement et Recherches Agricoles · BFPeuplements végétaux et bioagresseurs en milieu tropical · REUniversité Joseph Ki-Zerbo · BF

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCassava mosaic disease (CMD) is a major constraint on cassava cultivation in Africa. The disease is endemic and is caused by seven distinct cassava mosaic geminiviruses (CMGs), some of them including several variants.

findingsFrom cassava leaf samples presenting CMD symptoms collected in Burkina Faso, four DNA-A begomovirus components were cloned and sequenced, showing 99.9% nucleotide identity among them. These isolates are most closely related to African cassava mosaic virus (ACMV) but share less than 89% nucleotide identity (taxonomic threshold) with any previously described begomovirus. A DNA-B genomic component, sharing 93% nucleotide identity with DNA-B of ACMV, was also characterized. Since all genomic components have a typical genome organization of Old World bipartite begomoviruses, this new species was provisionally named African cassava mosaic Burkina Faso virus (ACMBFV). Recombination analysis of the new virus demonstrated an interspecies recombinant origin, with major parents related to West African isolates of ACMV, and minor parents related to Tomato leaf curl Cameroon virus and Cotton leaf curl Gezira virus.

conclusionThis is the first report of an ACMV-like recombinant begomovirus arisen by interspecific recombination between bipartite and monopartite African begomoviruses.

Indexed as

Gene Transfer, HorizontalBegomovirusDNA, ViralEvolution, MolecularGene OrderManihotPhylogenyDNA, Viral

Identifiers

PMID22416906
PMCPMC3328289
OpenAlexW2158595015

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.