Evidence map›Paper›PMID 22415831›Full record

ArticleNature communications2012

Multiple exposures to drought 'train' transcriptional responses in Arabidopsis.

Yong Ding, Michael Fromm, Zoya Avramova

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Nature communications, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 269 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
269citing papers in PubMed, 2 pooled it
24.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

269 citing papers in PubMed, 2 syntheses or guidelines pooled it, 630 citations in OpenAlex.

  1. Pooled it
  2. Pearl millet response to drought: A review.Frontiers in plant science · 2023
    Pooled it
  3. Review
  4. Article
  5. Drought Stress Mediated Changes in Food Crops: Mechanisms and Remediation Strategies.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  6. Abscisic Acid-Mediated Drought Tolerance inCurrent issues in molecular biology · 2026
    Review
  7. Article
  8. Dehydration Stress Memory Genes in Tomato (International journal of molecular sciences · 2026
    Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. In thePNAS nexus · 2026
    Article
  17. Article
  18. Article
  19. Review
  20. Review

209 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yong DingUniversity of Nebraska School of Biological Sciences, 1901 Vine Street, Lincoln 68588, USA.
Michael Fromm
Zoya Avramova
University of Nebraska–Lincoln · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pre-exposure to stress may alter plants' subsequent responses by producing faster and/or stronger reactions implying that plants exercise a form of 'stress memory'. The mechanisms of plants' stress memory responses are poorly understood leaving this fundamental biological question unanswered. Here we show that during recurring dehydration stresses Arabidopsis plants display transcriptional stress memory demonstrated by an increase in the rate of transcription and elevated transcript levels of a subset of the stress-response genes (trainable genes). During recovery (watered) states, trainable genes produce transcripts at basal (preinduced) levels, but remain associated with atypically high H3K4me3 and Ser5P polymerase II levels, indicating that RNA polymerase II is stalled. This is the first example of a stalled RNA polymerase II and its involvement in transcriptional memory in plants. These newly discovered phenomena might be a general feature of plant stress-response systems and could lead to novel approaches for increasing the flexibility of a plant's ability to respond to the environment.

Indexed as

DroughtsArabidopsisArabidopsis ProteinsEpigenesis, GeneticGene Expression Regulation, PlantGenes, PlantHistone-Lysine N-MethyltransferaseHistonesrab GTP-Binding ProteinsRNA, PlantRNA Polymerase IIStress, PhysiologicalTranscription FactorsArabidopsis ProteinsAt2g31650 protein, ArabidopsisHistone-Lysine N-MethyltransferaseHistonesrab18 protein, Arabidopsisrab GTP-Binding ProteinsRNA, PlantRNA Polymerase IITranscription Factors

Identifiers

PMID22415831
OpenAlexW2010678358

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.