Evidence map›Paper›PMID 22415824›Full record

ArticleNature communications2012

SUMO modification of the neuroprotective protein TDP1 facilitates chromosomal single-strand break repair.

Jessica J R Hudson, Shih-Chieh Chiang, Owen S Wells, Chris Rookyard, Sherif F El-Khamisy

Open access · hybridAbstract read
In one paragraph

Article in Nature communications, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. SUMO and the DNA damage response.Biochemical Society transactions · 2024
    Review
  5. Decoding mitochondrial DNA damage and repair associated withFrontiers in cellular and infection microbiology · 2024
    Review
  6. Article
  7. Review
  8. SUMO: A Swiss Army Knife for Eukaryotic Topoisomerases.Frontiers in molecular biosciences · 2022
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. DNA- and DNA-Protein-Crosslink Repair in Plants.International journal of molecular sciences · 2019
    Review
  19. Review
  20. Replication-Coupled DNA Repair.Molecular cell · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Jessica J R HudsonGenome Damage and Stability Centre, University of Sussex, Science Park Road, Falmer, Brighton BN1 9RQ, UK.
Shih-Chieh Chiang
Owen S Wells
Chris Rookyard
Sherif F El-Khamisy
University of Sussex · GB

Funding

Medical Research CouncilWellcome TrustWellcome Trust 085284Wellcome Trust 091043
6 · The paper itself

Abstract

Breaking and sealing one strand of DNA is an inherent feature of chromosome metabolism to overcome torsional barriers. Failure to reseal broken DNA strands results in protein-linked DNA breaks, causing neurodegeneration in humans. This is typified by defects in tyrosyl DNA phosphodiesterase 1 (TDP1), which removes stalled topoisomerase 1 peptides from DNA termini. Here we show that TDP1 is a substrate for modification by the small ubiquitin-like modifier SUMO. We purify SUMOylated TDP1 from mammalian cells and identify the SUMOylation site as lysine 111. While SUMOylation exhibits no impact on TDP1 catalytic activity, it promotes its accumulation at sites of DNA damage. A TDP1 SUMOylation-deficient mutant displays a reduced rate of repair of chromosomal single-strand breaks arising from transcription-associated topoisomerase 1 activity or oxidative stress. These data identify a role for SUMO during single-strand break repair, and suggest a mechanism for protecting the nervous system from genotoxic stress.

Indexed as

DNA Breaks, Single-StrandedDNA RepairBinding SitesCell LineDNA DamageDNA Topoisomerases, Type IGreen Fluorescent ProteinsHEK293 CellsHumansMutant ProteinsNeurodegenerative DiseasesOxidative StressPhosphoric Diester HydrolasesSUMO-1 ProteinSumoylationTranscription, GeneticDNA Topoisomerases, Type IGreen Fluorescent ProteinsMutant ProteinsPhosphoric Diester HydrolasesSUMO-1 ProteinTDP1 protein, human

Identifiers

PMID22415824
PMCPMC3316882
OpenAlexW2013703419

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.