Evidence map›Paper›PMID 22414917›Full record

ArticleInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases2012

Evidence of purifying selection on merozoite surface protein 8 (MSP8) and 10 (MSP10) in Plasmodium spp.

M Andreína Pacheco, Alamelu P Elango, Abir A Rahman, David Fisher, William E Collins, John W Barnwell, Ananias A Escalante

Open access · greenAbstract read
In one paragraph

Article in Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. PvMSP8 as a NovelPathogens (Basel, Switzerland) · 2021
    Article
  8. Two 20-Residue-Long Peptides Derived fromInternational journal of molecular sciences · 2021
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. On the Evolution and Function ofFrontiers in genetics · 2018
    Article
  17. Article
  18. Identifying PotentialFrontiers in genetics · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

M Andreína PachecoCenter for Evolutionary Medicine and Informatics, The Biodesign Institute, Arizona State University, Tempe, AZ, United States.
Alamelu P Elango
Abir A Rahman
David Fisher
William E Collins
John W Barnwell
Ananias A Escalante
Arizona State University · USCenters for Disease Control and Prevention · USDivision of Parasitic Diseases and Malaria · US

Funding

Evolution of Plasmodium vivax and Asian Macaque MalariasR01GM080586 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI ESCALANTE, ANANIAS ALBERTO · 2008 to 2011
$1.2M
NIGMS NIH HHS R01 GM080586NIGMS NIH HHS R01GM80586
6 · The paper itself

Abstract

Evidence for natural selection, positive or negative, on gene encoding antigens may indicate variation or functional constraints that are immunologically relevant. Most malaria surface antigens with high genetic diversity have been reported to be under positive-diversifying selection. However, antigens with limited genetic variation are usually ignored in terms of the role that natural selection may have in generating such patterns. We investigated orthologous genes encoding two merozoite proteins, MSP8 and MSP10, among several mammalian Plasmodium spp. These antigens, together with MSP1, are among the few MSPs that have two epidermal growth factor-like domains (EGF) at the C-terminal. Those EGF are relatively conserved (low levels of genetic polymorphism) and have been proposed to act as ligands during the invasion of RBCs. We use several evolutionary genetic methods to detect patterns consistent with natural selection acting on MSP8 and MSP10 orthologs in the human parasites Plasmodium falciparum and P. vivax, as well as closely related malarial species found in non-human primates (NHPs). Overall, these antigens have low polymorphism in the human parasites in comparison with the orthologs from other Plasmodium spp. We found that the MSP10 gene polymorphism in P. falciparum only harbor non-synonymous substitutions, a pattern consistent with a gene under positive selection. Evidence of purifying selection was found on the polymorphism observed in both orthologs from P. cynomolgi, a non-human primate parasite closely related to P. vivax, but it was not conclusive in the human parasite. Yet, using phylogenetic base approaches, we found evidence for purifying selection on both MSP8 and MSP10 in the lineage leading to P. vivax. Such antigens evolving under strong functional constraints could become valuable vaccine candidates. We discuss how comparative approaches could allow detecting patterns consistent with negative selection even when there is low polymorphism in the extant populations.

Indexed as

Amino Acid SequenceAntigens, ProtozoanBayes TheoremBinding SitesEpidermal Growth FactorEvolution, MolecularGenes, ProtozoanHumansMalariaMolecular Sequence DataPhylogenyPlasmodiumPolymorphism, GeneticProtein Structure, TertiaryProtozoan ProteinsSelection, GeneticAntigens, ProtozoanEpidermal Growth Factormerozoite surface protein 8, PlasmodiumProtozoan Proteins

Identifiers

PMID22414917
PMCPMC4405235
OpenAlexW2072816037

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.