Evidence map›Paper›PMID 22414193›Full record

ArticleMicrobial biotechnology2012

Isolation and initial characterization of a novel type of Baeyer-Villiger monooxygenase activity from a marine microorganism.

Andrew Willetts, Ian Joint, Jack A Gilbert, William Trimble, Martin Mühling

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Andrew WillettsPlymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, UK. andrewj.willetts@btconnect.com
Ian Joint
Jack A Gilbert
William Trimble
Martin Mühling
Argonne National Laboratory · USPlymouth Marine Laboratory · GBMarine Biological Association of the United Kingdom · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel type of Baeyer-Villiger monooxygenase (BVMO) has been found in a marine strain of Stenotrophomonas maltophila strain PML168 that was isolated from a temperate intertidal zone. The enzyme is able to use NADH as the source of reducing power necessary to accept the atom of diatomic oxygen not incorporated into the oxyfunctionalized substrate. Growth studies have establish that the enzyme is inducible, appears to serve a catabolic role, and is specifically induced by one or more unidentified components of seawater as well as various anthropogenic xenobiotic compounds. A blast search of the primary sequence of the enzyme, recovered from the genomic sequence of the isolate, has placed this atypical BVMO in the context of the several hundred known members of the flavoprotein monooxygenase superfamily. A particular feature of this BVMO lies in its truncated C-terminal domain, which results in a relatively small protein (357 amino acids; 38.4 kDa). In addition, metagenomic screening has been conducted on DNA recovered from an extensive range of marine environmental samples to gauge the relative abundance and distribution of similar enzymes within the global marine microbial community. Although low, abundance was detected in samples from many marine provinces, confirming the potential for biodiscovery in marine microorganisms.

Indexed as

Amino Acid SequenceCluster AnalysisCoenzymesGene Expression ProfilingGene Expression Regulation, BacterialMetagenomeMixed Function OxygenasesMolecular Sequence DataMolecular WeightNADOxidation-ReductionPhylogenySeawaterSequence Homology, Amino AcidStenotrophomonasCoenzymesMixed Function OxygenasesNAD

Identifiers

PMID22414193
PMCPMC3815331
OpenAlexW1860146300

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.