Evidence map›Paper›PMID 22412962›Full record

ArticlePloS one2012

Spoligotyping and drug resistance analysis of Mycobacterium tuberculosis strains from national survey in China.

Yu Pang, Yang Zhou, Bing Zhao, Guan Liu, Guanglu Jiang, Hui Xia, Yuanyuan Song, Yuanyuan Shang, Shengfen Wang, Yan-lin Zhao

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 135 citations in OpenAlex.

  1. Trial
  2. Trial
  3. First Insight into the Molecular Epidemiology ofBioMed research international · 2017
    Trial
  4. Trial
  5. Article
  6. Genotypic Characteristics ofChina CDC weekly · 2025
    Article
  7. Review
  8. Insidious transmission of Mycobacterium tuberculosis in Ordos, China: a molecular epidemiology study.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
    Article
  9. Article
  10. Article
  11. Association of Single-Nucleotide Polymorphisms in theInfection and drug resistance · 2023
    Article
  12. Article
  13. Molecular Epidemiology of ClinicalInfection and drug resistance · 2023
    Article
  14. Article
  15. Article
  16. Spoligotyping of Clinical Isolates ofFrontiers in public health · 2022
    Article
  17. Article
  18. Article
  19. Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Yu PangChinese Center for Disease Control and Prevention, Beijing, China.
Yang Zhou
Bing Zhao
Guan Liu
Guanglu Jiang
Hui Xia
Yuanyuan Song
Yuanyuan Shang
Shengfen Wang
Yan-lin Zhao
Chinese Center For Disease Control and Prevention · CNBeijing Chest Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTuberculosis (TB), caused by Mycobacterium tuberculosis complex (MTBC), is one of the major causes of death in the world today. Although China has the second largest global case rate of tuberculosis, a systematic study of TB prevalence in China has not been completed. From 2006 to 2007, the base line surveillance of tuberculosis was carried out by Ministry of Health, and more than 4000 representative strains were selected from 31 provinces in China. METHODOLOGY/PRINCIPAL

findingsThe aim of the present research was to survey the genotypes of representative Mycobacterium tuberculosis (M. tuberculosis) strains from China using spacer oligonucleotide typing (spoligotyping), and to analyze the relationship between genotype and drug resistance for the first time. A total of 4017 clinical isolates were collected from 2007 to 2008 throughout China. Among those M. tuberculosis isolates, 2500 (62.2%) isolates were Beijing genotypes. The percentage of Beijing genotypes in northern China was higher than in southern China (76.5% vs. 53.2%). Additionally, the frequencies of rifampin-resistant, ofloxacin-resistant and multidrug-resistant isolates were significantly higher in Beijing genotype strains than non-Beijing strains. Furthermore, a novel genotype named "China Southern genotype (CS)" was only isolated from Fujian and Guangdong provinces. Hence, it is very practical to uncover the reason for prevalence of the CS type in southern China. CONCLUSIONS/SIGNIFICANCE: In conclusion, Beijing family genotypes were still the predominant genotype throughout China, which exhibited a greater correlation with rifampin-resistance, ofloxacin-resistance and MDR phenotypes than other TB spoligotypes, and some regions of China showed several unique characters in the distribution of M. tuberculosis genotypes. Our research represents an important contribution for the TB control and research community, which completes broad pictures on drug resistance levels and distribution of M. tuberculosis strain types over China.

Indexed as

Antitubercular AgentsChinaDrug Resistance, BacterialGenotypeHumansMicrobial Sensitivity TestsMolecular TypingMycobacterium tuberculosisPhylogenyPhylogeographyPopulation SurveillancePrevalenceTuberculosisAntitubercular Agents

Identifiers

PMID22412962
PMCPMC3296750
OpenAlexW2000067139

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.