ArticlePLoS computational biology2012
Ensemble models of neutrophil trafficking in severe sepsis.
Article in PLoS computational biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
15 citing papers in PubMed, 35 citations in OpenAlex.
- A Whole-Body Mathematical Model of Sepsis Progression and Treatment Designed in the BioGears Physiology Engine.Frontiers in physiology · 2019Article
- Multiscale Agent-Based and Hybrid Modeling of the Tumor Immune Microenvironment.Processes (Basel, Switzerland) · 2019Article
- Inflammation and Disease: Modelling and Modulation of the Inflammatory Response to Alleviate Critical Illness.Current opinion in systems biology · 2018Article
- JuPOETs: a constrained multiobjective optimization approach to estimate biochemical model ensembles in the Julia programming language.BMC systems biology · 2017Article
- Effectiveness of Multiple Blood-Cleansing Interventions in Sepsis, Characterized in Rats.Scientific reports · 2016Article
- Broad spectrum immunomodulation using biomimetic blood cell margination for sepsis therapy.Lab on a chip · 2016Article
- Modeling and Hemofiltration Treatment of Acute Inflammation.Processes (Basel, Switzerland) · 2016Article
- A Neutrophil Phenotype Model for Extracorporeal Treatment of Sepsis.PLoS computational biology · 2015Article
- The inverse problem in mathematical biology.Mathematical biosciences · 2015Review
- Mathematical Modeling of Early Cellular Innate and Adaptive Immune Responses to Ischemia/Reperfusion Injury and Solid Organ Allotransplantation.Frontiers in immunology · 2015Article
- Sepsis pathophysiology and anesthetic consideration.Cardiovascular & hematological disorders drug targets · 2015Review
- From data patterns to mechanistic models in acute critical illness.Journal of critical care · 2014Review
- Modulation of chemokine gradients by apheresis redirects leukocyte trafficking to different compartments during sepsis, studies in a rat model.Critical care (London, England) · 2014Article
- In silico modeling: methods and applications to trauma and sepsis.Critical care medicine · 2013Review
- Multiscale models of breast cancer progression.Annals of biomedical engineering · 2012Review
Corrections and comments
- Erratum issuedCorrection: ensemble models of neutrophil trafficking in severe sepsis.2012 · Song, Sang O K [corrected to Song, Sang Ok]
Authors and funding
7 authors at 1 institution in 1 country.
Funding
Abstract
A hallmark of severe sepsis is systemic inflammation which activates leukocytes and can result in their misdirection. This leads to both impaired migration to the locus of infection and increased infiltration into healthy tissues. In order to better understand the pathophysiologic mechanisms involved, we developed a coarse-grained phenomenological model of the acute inflammatory response in CLP (cecal ligation and puncture)-induced sepsis in rats. This model incorporates distinct neutrophil kinetic responses to the inflammatory stimulus and the dynamic interactions between components of a compartmentalized inflammatory response. Ensembles of model parameter sets consistent with experimental observations were statistically generated using a Markov-Chain Monte Carlo sampling. Prediction uncertainty in the model states was quantified over the resulting ensemble parameter sets. Forward simulation of the parameter ensembles successfully captured experimental features and predicted that systemically activated circulating neutrophils display impaired migration to the tissue and neutrophil sequestration in the lung, consequently contributing to tissue damage and mortality. Principal component and multiple regression analyses of the parameter ensembles estimated from survivor and non-survivor cohorts provide insight into pathologic mechanisms dictating outcome in sepsis. Furthermore, the model was extended to incorporate hypothetical mechanisms by which immune modulation using extracorporeal blood purification results in improved outcome in septic rats. Simulations identified a sub-population (about 18% of the treated population) that benefited from blood purification. Survivors displayed enhanced neutrophil migration to tissue and reduced sequestration of lung neutrophils, contributing to improved outcome. The model ensemble presented herein provides a platform for generating and testing hypotheses in silico, as well as motivating further experimental studies to advance understanding of the complex biological response to severe infection, a problem of growing magnitude in humans.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.