ArticleEcology and evolution2012
Chloroplast genome sequence confirms distinctness of Australian and Asian wild rice.
Article in Ecology and evolution, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.
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Who cites it
37 citing papers in PubMed, 92 citations in OpenAlex.
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- Supporting in situ conservation of the genetic diversity of crop wild relatives using genomic technologies.Molecular ecology · 2022Review
- Testing the Linearity Assumption for Starch Structure-Property Relationships in Rices.Frontiers in nutrition · 2022Article
- Potential of Genome Editing to Capture Diversity From Australian Wild Rice Relatives.Frontiers in genome editing · 2022Review
- Dynamics of photosynthetic induction and relaxation within the canopy of rice and two wild relatives.Food and energy security · 2021Article
- Chloroplast genome sequence of a yellow colored rice (Mitochondrial DNA. Part B, Resources · 2020Article
- Some Accessions of Amazonian Wild Rice (Plants (Basel, Switzerland) · 2020Article
- Current status of genomic resources on wild relatives of rice.Breeding science · 2020Article
- Molecular and Morphological Divergence of Australian Wild Rice.Plants (Basel, Switzerland) · 2020Article
- Relationships between Iraqi Rice Varieties at the Nuclear and Plastid Genome Levels.Plants (Basel, Switzerland) · 2019Article
- Structural variation of the complete chloroplast genome and plastid phylogenomics of the genus Asteropyrum (Ranunculaceae).Scientific reports · 2019Article
- Genetic diversity among perennial wild riceEcology and evolution · 2019Article
- Australian Wild Rice Populations: A Key Resource for Global Food Security.Frontiers in plant science · 2019Review
- Evolution ofCommunications biology · 2019Article
- Role of genomics in promoting the utilization of plant genetic resources in genebanks.Briefings in functional genomics · 2018Review
- Diversity and evolution of rice progenitors in Australia.Ecology and evolution · 2018Article
- A 250 plastome phylogeny of the grass family (Poaceae): topological support under different data partitions.PeerJ · 2018Article
- Sequencing of Australian wild rice genomes reveals ancestral relationships with domesticated rice.Plant biotechnology journal · 2017Article
Corrections and comments
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Authors and funding
5 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Cultivated rice (Oryza sativa) is an AA genome Oryza species that was most likely domesticated from wild populations of O. rufipogon in Asia. O. rufipogon and O. meridionalis are the only AA genome species found within Australia and occur as widespread populations across northern Australia. The chloroplast genome sequence of O. rufipogon from Asia and Australia and O. meridionalis and O. australiensis (an Australian member of the genus very distant from O. sativa) was obtained by massively parallel sequencing and compared with the chloroplast genome sequence of domesticated O. sativa. Oryza australiensis differed in more than 850 sites single nucleotide polymorphism or indel from each of the other samples. The other wild rice species had only around 100 differences relative to cultivated rice. The chloroplast genomes of Australian O. rufipogon and O. meridionalis were closely related with only 32 differences. The Asian O. rufipogon chloroplast genome (with only 68 differences) was closer to O. sativa than the Australian taxa (both with more than 100 differences). The chloroplast sequences emphasize the genetic distinctness of the Australian populations and their potential as a source of novel rice germplasm. The Australian O. rufipogon may be a perennial form of O. meridionalis.
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