ArticleEcology and evolution2012
Signatures of natural selection among lineages and habitats in Oncorhynchus mykiss.
Article in Ecology and evolution, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
17 citing papers in PubMed, 77 citations in OpenAlex.
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- Multiple Horizontal Transfers of Immune Genes Between Distantly Related Teleost Fishes.Molecular biology and evolution · 2025Article
- Genome-wide detection of positive and balancing signatures of selection shared by four domesticated rainbow trout populations (Oncorhynchus mykiss).Genetics, selection, evolution : GSE · 2024Article
- Single Nucleotide Polymorphism Markers with Applications in Conservation and Exploitation of Aquatic Natural Populations.Animals : an open access journal from MDPI · 2023Review
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- Restricted gene flow between residentEcology and evolution · 2017Article
- Genomic signatures amongEvolutionary applications · 2016Article
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- Divergence in expression of candidate genes for the smoltification process between juvenile resident rainbow and anadromous steelhead trout.Marine biotechnology (New York, N.Y.) · 2014Article
- Relative contributions of neutral and non-neutral genetic differentiation to inform conservation of steelhead trout across highly variable landscapes.Evolutionary applications · 2014Article
- Rapid parallel evolution of standing variation in a single, complex, genomic region is associated with life history in steelhead/rainbow trout.Proceedings. Biological sciences · 2014Article
- On the stability of the Bayenv method in assessing human SNP-environment associations.Human genomics · 2014Article
- Applications in the search for genomic selection signatures in fish.Frontiers in genetics · 2014Review
- Population genetics provides new insights into biomarker prevalence in dab (Limanda limanda L.): a key marine biomonitoring species.Evolutionary applications · 2013Article
- Article
- Evaluating adaptive divergence between migratory and nonmigratory ecotypes of a salmonid fish, Oncorhynchus mykiss.G3 (Bethesda, Md.) · 2013Article
- Genome-wide association reveals genetic basis for the propensity to migrate in wild populations of rainbow and steelhead trout.Molecular ecology · 2013Article
Corrections and comments
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Authors and funding
7 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Recent advances in molecular interrogation techniques now allow unprecedented genomic inference about the role of adaptive genetic divergence in wild populations. We used high-throughput genotyping to screen a genome-wide panel of 276 single nucleotide polymorphisms (SNPs) for the economically and culturally important salmonid Oncorhynchus mykiss. Samples included 805 individuals from 11 anadromous and resident populations from the northwestern United States and British Columbia, and represented two major lineages including paired populations of each life history within single drainages of each lineage. Overall patterns of variation affirmed clear distinctions between lineages and in most instances, isolation by distance within them. Evidence for divergent selection at eight candidate loci included significant landscape correlations, particularly with temperature. High diversity of two nonsynonymous mutations within the peptide-binding region of the major histocompatibility complex (MHC) class II (DAB) gene provided signatures of balancing selection. Weak signals for potential selection between sympatric resident and anadromous populations were revealed from genome scans and allele frequency comparisons. Our results suggest an important adaptive role for immune-related functions and present a large genomic resource for future studies.
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