ArticleMolecular breeding : new strategies in plant improvement2012
Diversity arrays technology (DArT) markers in apple for genetic linkage maps.
Article in Molecular breeding : new strategies in plant improvement, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
22 citing papers in PubMed.
- Characterization of spelt wheat (Triticum spelta L.) genotypes using DArTseq technology.Journal of applied genetics · 2026Article
- Molecular mapping of QTLs for stripe rust resistance in bread wheat (Triticum aestivum L.).BMC plant biology · 2026Article
- QTL mapping for leaf rust resistance in bread wheat using PBW343/W8627 RIL population.Frontiers in plant science · 2026Article
- Dissecting fruit weight and quality traits in Australian passion fruit through genetic linkage mapping and QTL analysis.Frontiers in plant science · 2026Article
- Wind Pollination of Apple Flowers Under Insect Exclusion Nets Questions the Insect-Dependent Pollination Model of Modern Apple Plantations.Plants (Basel, Switzerland) · 2025Article
- Article
- QTL Mapping and Phenotypic Variation for Seedling Vigour Traits in Barley (Plants (Basel, Switzerland) · 2021Article
- Article
- Multi-parent populations in crops: a toolbox integrating genomics and genetic mapping with breeding.Heredity · 2020Review
- New Male Specific Markers for Hop and Application in Breeding Program.Scientific reports · 2019Article
- High density SNP and DArT-based genetic linkage maps of two closely related oil palm populations.Journal of applied genetics · 2018Article
- Article
- Ultra-high-throughput DArTseq-based silicoDArT and SNP markers for genomic studies in macadamia.PloS one · 2018Article
- A high-density, multi-parental SNP genetic map on apple validates a new mapping approach for outcrossing species.Horticulture research · 2016Article
- DArT Markers Effectively Target Gene Space in the Rye Genome.Frontiers in plant science · 2016Article
- The genetic diversity of triticale genotypes involved in Polish breeding programs.SpringerPlus · 2016Article
- Article
- Use of EST-SSR markers for evaluating genetic diversity and fingerprinting celery (Apium graveolens L.) cultivars.Molecules (Basel, Switzerland) · 2014Article
- Highly efficient genotyping of rice biparental populations by GoldenGate assays based on parental resequencing.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014Article
- Genetic analysis of metabolites in apple fruits indicates an mQTL hotspot for phenolic compounds on linkage group 16.Journal of experimental botany · 2012Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
15 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Diversity Arrays Technology (DArT) provides a high-throughput whole-genome genotyping platform for the detection and scoring of hundreds of polymorphic loci without any need for prior sequence information. The work presented here details the development and performance of a DArT genotyping array for apple. This is the first paper on DArT in horticultural trees. Genetic mapping of DArT markers in two mapping populations and their integration with other marker types showed that DArT is a powerful high-throughput method for obtaining accurate and reproducible marker data, despite the low cost per data point. This method appears to be suitable for aligning the genetic maps of different segregating populations. The standard complexity reduction method, based on the methylation-sensitive PstI restriction enzyme, resulted in a high frequency of markers, although there was 52-54% redundancy due to the repeated sampling of highly similar sequences. Sequencing of the marker clones showed that they are significantly enriched for low-copy, genic regions. The genome coverage using the standard method was 55-76%. For improved genome coverage, an alternative complexity reduction method was examined, which resulted in less redundancy and additional segregating markers. The DArT markers proved to be of high quality and were very suitable for genetic mapping at low cost for the apple, providing moderate genome coverage. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s11032-011-9579-5) contains supplementary material, which is available to authorized users.
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.