Evidence map›Paper›PMID 22405652›Full record

ArticleMolecular cell2012

Mechanism of translesion transcription by RNA polymerase II and its role in cellular resistance to DNA damage.

Celine Walmacq, Alan C M Cheung, Maria L Kireeva, Lucyna Lubkowska, Chengcheng Ye, Deanna Gotte, Jeffrey N Strathern, Thomas Carell, Patrick Cramer, Mikhail Kashlev

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
6.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 124 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. DNA lesion bypass and the stochastic dynamics of transcription-coupled repair.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Structural advances in transcription elongation.Current opinion in structural biology · 2022
    Review
  11. Review
  12. Review
  13. Article
  14. The emergence of the postgenomic gene.European journal for philosophy of science · 2022
    Article
  15. DNA Polymerase η Promotes the Transcriptional Bypass ofJournal of the American Chemical Society · 2021
    Article
  16. Article
  17. Genome-wide surveillance of transcription errors in response to genotoxic stress.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Review
  19. Formation and Recognition of UV-Induced DNA Damage within Genome Complexity.International journal of molecular sciences · 2020
    Review
  20. Article

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Celine WalmacqNCI Center for Cancer Research, Frederick, MD 21702, USA.
Alan C M Cheung
Maria L Kireeva
Lucyna Lubkowska
Chengcheng Ye
Deanna Gotte
Jeffrey N Strathern
Thomas Carell
Patrick Cramer
Mikhail Kashlev
Center for Cancer Research · USCenter for Integrated Protein Science Munich · DELudwig-Maximilians-Universität München · DEMax Planck Society · DE

Funding

Fidelity of TranscriptionZIABC010992 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI STRATHERN, JEFFREY · 2009 to 2016
$5.5M
Mechanism of transcription-coupled DNA repair and transcription mutagenesisZIABC011202 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KASHLEV, MIKHAIL · 2009 to 2020
$4.5M
Intramural NIH HHS Z99 CA999999Intramural NIH HHS ZIA BC011202NCI NIH HHS Y99 CA999999
6 · The paper itself

Abstract

UV-induced cyclobutane pyrimidine dimers (CPDs) in the template DNA strand stall transcription elongation by RNA polymerase II (Pol II). If the nucleotide excision repair machinery does not promptly remove the CPDs, stalled Pol II creates a roadblock for DNA replication and subsequent rounds of transcription. Here we present evidence that Pol II has an intrinsic capacity for translesion synthesis (TLS) that enables bypass of the CPD with or without repair. Translesion synthesis depends on the trigger loop and bridge helix, the two flexible regions of the Pol II subunit Rpb1 that participate in substrate binding, catalysis, and translocation. Substitutions in Rpb1 that promote lesion bypass in vitro increase UV resistance in vivo, and substitutions that inhibit lesion bypass decrease cell survival after UV irradiation. Thus, translesion transcription becomes essential for cell survival upon accumulation of the unrepaired CPD lesions in genomic DNA.

Indexed as

DNA DamageDNA, FungalDNA ReplicationGenome, FungalPyrimidine DimersRadiation ToleranceRNA Polymerase IISaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription, GeneticUltraviolet RaysDNA, FungalPyrimidine DimersRNA Polymerase IIRPB1 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID22405652
PMCPMC3329276
OpenAlexW2132564075

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.