Evidence map›Paper›PMID 22405209›Full record

ArticleNeuron2012

Linking the computational structure of variance adaptation to biophysical mechanisms.

Yusuf Ozuysal, Stephen A Baccus

Abstract read
In one paragraph

Article in Neuron, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Systematic reduction of the dimensionality of natural scenes allows accurate predictions of retinal ganglion cell spike outputs.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Article
  6. Predicting and Manipulating Cone Responses to Naturalistic Inputs.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Efficient and adaptive sensory codes.Nature neuroscience · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Multiple Timescales Account for Adaptive Responses across Sensory Cortices.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yusuf OzuysalDepartment of Electrical Engineering, Stanford University, Stanford, CA 94305, USA.
Stephen A Baccus

Funding

Function and circuitry of adaptive inhibition in the retinaR01EY022933 · NEI · STANFORD UNIVERSITY · PI STEPHEN A BACCUS · 2013 to 2026
$4.8M
Circuit Mechanisms of Neural Coding in the RetinaR01EY016842 · NEI · STANFORD UNIVERSITY · PI BACCUS, STEPHEN A · 2006 to 2010
$1.9M
NEI NIH HHS R01 EY016842NEI NIH HHS R01 EY022933
6 · The paper itself

Abstract

In multiple sensory systems, adaptation to the variance of a sensory input changes the sensitivity, kinetics, and average response over timescales ranging from < 100 ms to tens of seconds. Here, we present a simple, biophysically relevant model of retinal contrast adaptation that accurately captures both the membrane potential response and all adaptive properties. The adaptive component of this model is a first-order kinetic process of the type used to describe ion channel gating and synaptic transmission. From the model, we conclude that all adaptive dynamics can be accounted for by depletion of a signaling mechanism, and that variance adaptation can be explained as adaptation to the mean of a rectified signal. The model parameters show strong similarity to known properties of bipolar cell synaptic vesicle pools. Diverse types of adaptive properties that implement theoretical principles of efficient coding can be generated by a single type of molecule or synapse with just a few microscopic states.

Indexed as

Computer SimulationModels, NeurologicalAction PotentialsAdaptation, PhysiologicalAmacrine CellsAnimalsBiophysical PhenomenaCaudataNeuronsPhotic StimulationRetinaRetinal Bipolar CellsRetinal Ganglion CellsVisual Pathways

Identifiers

PMID22405209
PMCPMC4046855

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.