Evidence map›Paper›PMID 22405006›Full record

ArticleStructure (London, England : 1993)2012

Variable lymphocyte receptor recognition of the immunodominant glycoprotein of Bacillus anthracis spores.

Robert N Kirchdoerfer, Brantley R Herrin, Byung Woo Han, Charles L Turnbough, Max D Cooper, Ian A Wilson

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Characterization of Hagfish (Journal of immunology (Baltimore, Md. : 1950) · 2020
    Article
  9. Article
  10. The variable lymphocyte receptor as an antibody alternative.Current opinion in biotechnology · 2018
    Review
  11. Article
  12. Article
  13. Crystal structure of an anti-idiotype variable lymphocyte receptor.Acta crystallographica. Section F, Structural biology communications · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Robert N KirchdoerferDepartment of Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.
Brantley R Herrin
Byung Woo Han
Charles L Turnbough
Max D Cooper
Ian A Wilson
Emory Healthcare · USScripps Research Institute · USSeoul National University · KRUniversity of Alabama at Birmingham · US

Funding

IMMUNOLOGIC DISEASES AND BASIC IMMUNOLOGYT32AI007051 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Laurie Ellen Harrington · 1985 to 2026
$13.1M
Characterization of the Lamprey Adaptive Immune SystemR01AI072435 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Max Dale Cooper · 2007 to 2026
$8.1M
Structural Basis of T Cell Receptor RecognitionR37AI042266 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 2003 to 2012
$5.8M
Structural basis of TLR and NLR recognition and signalingR01AI042266 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI WILSON, IAN A · 1998 to 2017
$3.7M
NCI NIH HHS Y1-CO-1020NIAID NIH HHS AI042266NIAID NIH HHS AI072435NIAID NIH HHS AI081777NIAID NIH HHS R01 AI042266NIAID NIH HHS R01 AI072435NIAID NIH HHS R37 AI042266NIAID NIH HHS T32 AI007051NIGMS NIH HHS Y1-GM-1104
6 · The paper itself

Abstract

Variable lymphocyte receptors (VLRs) are the adaptive immune receptors of jawless fish, which evolved adaptive immunity independent of other vertebrates. In lieu of the immunoglobulin fold-based T and B cell receptors, lymphocyte-like cells of jawless fish express VLRs (VLRA, VLRB, or VLRC) composed of leucine-rich repeats and are similar to toll-like receptors (TLRs) in structure, but antibodies (VLRB) and T cell receptors (VLRA and VLRC) in function. Here, we present the structural and biochemical characterization of VLR4, a VLRB, in complex with BclA, the immunodominant glycoprotein of Bacillus anthracis spores. Using a combination of crystallography, mutagenesis, and binding studies, we delineate the mode of antigen recognition and binding between VLR4 and BclA, examine commonalities in VLRB recognition of antigens, and demonstrate the potential of VLR4 as a diagnostic tool for the identification of B. anthracis spores.

Indexed as

Models, MolecularAnimalsBacillus anthracisCloning, MolecularCrystallographyGlycoproteinsImmunodominant EpitopesLampreysMutagenesisProtein BindingReceptors, ImmunologicSpores, BacterialGlycoproteinsImmunodominant EpitopesReceptors, Immunologic

Identifiers

PMID22405006
PMCPMC3337218
OpenAlexW2032527122

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.