Evidence map›Paper›PMID 22403005›Full record

ArticleJournal of structural and functional genomics2012

Crystal structures of putative phosphoglycerate kinases from B. anthracis and C. jejuni.

Heping Zheng, Ekaterina V Filippova, Karolina L Tkaczuk, Piotr Dworzynski, Maksymilian Chruszcz, Przemyslaw J Porebski, Zdzislaw Wawrzak, Olena Onopriyenko, Marina Kudritska, Sarah Grimshaw and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of structural and functional genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Heping ZhengDepartment of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, VA 22908, USA.
Ekaterina V Filippova
Karolina L Tkaczuk
Piotr Dworzynski
Maksymilian Chruszcz
Przemyslaw J Porebski
Zdzislaw Wawrzak
Olena Onopriyenko
Marina Kudritska
Sarah Grimshaw
Alexei Savchenko
Wayne F Anderson
Wladek Minor
Joint Center for Structural Genomics · USNorthwestern University · USJ. Craig Venter Institute · USUniversity of Toronto · CAUniversity of Virginia · US

Funding

NIAID NIH HHS HHSN272200700058C
6 · The paper itself

Abstract

Phosphoglycerate kinase (PGK) is indispensable during glycolysis for anaerobic glucose degradation and energy generation. Here we present comprehensive structure analysis of two putative PGKs from Bacillus anthracis str. Sterne and Campylobacter jejuni in the context of their structural homologs. They are the first PGKs from pathogenic bacteria reported in the Protein Data Bank. The crystal structure of PGK from Bacillus anthracis str. Sterne (BaPGK) has been determined at 1.68 Å while the structure of PGK from Campylobacter jejuni (CjPGK) has been determined at 2.14 Å resolution. The proteins' monomers are composed of two domains, each containing a Rossmann fold, hinged together by a helix which can be used to adjust the relative position between two domains. It is also shown that apo-forms of both BaPGK and CjPGK adopt open conformations as compared to the substrate and ATP bound forms of PGK from other species.

Indexed as

Adenosine TriphosphateApoenzymesBacillus anthracisBacterial ProteinsCampylobacter jejuniCrystallography, X-RayPhosphoglycerate KinaseProtein FoldingProtein Structure, TertiaryAdenosine TriphosphateApoenzymesBacterial ProteinsPhosphoglycerate Kinase

Identifiers

PMID22403005
PMCPMC4485498
OpenAlexW2165120792

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.