Evidence map›Paper›PMID 22402491›Full record

ArticleNucleic acids research2012

Combination of Sleeping Beauty transposition and chemically induced dimerization selection for robust production of engineered cells.

Nataly Kacherovsky, Michael A Harkey, C Anthony Blau, Cecilia M Giachelli, Suzie H Pun

Abstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nataly KacherovskyDepartment of Bioengineering, University of Washington, Seattle, WA 98195, USA.
Michael A Harkey
C Anthony Blau
Cecilia M Giachelli
Suzie H Pun

Funding

CORE--VECTOR PRODUCTIONP30DK056465 · NIDDK · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HEIMFELD, SHELLY · 1999 to 2014
$14.9M
Receptor Specificity in the Proliferation and Differentiation of Stem CellsR01DK074522 · NIDDK · UNIVERSITY OF WASHINGTON · PI BLAU, C. ANTHONY · 2006 to 2009
$1.2M
NIDDK NIH HHS P30 DK056465NIDDK NIH HHS P30 DK56465NIDDK NIH HHS R01DK74522
6 · The paper itself

Abstract

The main methods for producing genetically engineered cells use viral vectors for which safety issues and manufacturing costs remain a concern. In addition, selection of desired cells typically relies on the use of cytotoxic drugs with long culture times. Here, we introduce an efficient non-viral approach combining the Sleeping Beauty (SB) Transposon System with selective proliferation of engineered cells by chemically induced dimerization (CID) of growth factor receptors. Minicircles carrying a SB transposon cassette containing a reporter transgene and a gene for the F36VFGFR1 fusion protein were delivered to the hematopoietic cell line Ba/F3. Stably-transduced Ba/F3 cell populations with >98% purity were obtained within 1 week using this positive selection strategy. Copy number analysis by quantitative PCR (qPCR) revealed that CID-selected cells contain on average higher copy numbers of transgenes than flow cytometry-selected cells, demonstrating selective advantage for cells with multiple transposon insertions. A diverse population of cells is present both before and after culture in CID media, although site-specific qPCR of transposon junctions show that population diversity is significantly reduced after selection due to preferential expansion of clones with multiple integration events. This non-viral, positive selection approach is an attractive alternative for producing engineered cells.

Indexed as

DNA Transposable ElementsAnimalsCell EngineeringCell LineCell Line, TransformedCell ProliferationCell SurvivalDimerizationGenetic EngineeringGreen Fluorescent ProteinsMicePlasmidsReceptor, Fibroblast Growth Factor, Type 1Recombinant Fusion ProteinsTacrolimusTacrolimus Binding ProteinsAP20187DNA Transposable Elementsenhanced green fluorescent proteinGreen Fluorescent ProteinsReceptor, Fibroblast Growth Factor, Type 1Recombinant Fusion ProteinsTacrolimusTacrolimus Binding Proteins

Identifiers

PMID22402491
PMCPMC3367214

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.