Evidence map›Paper›PMID 22399806›Full record

ArticleJournal of cell science2012

A motif of eleven amino acids is a structural adaptation that facilitates motor capability of eutherian prestin.

Xiaodong Tan, Jason L Pecka, Jie Tang, Sándor Lovas, Kirk W Beisel, David Z Z He

Abstract read
In one paragraph

Article in Journal of cell science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Article
  6. Article
  7. Outer Hair Cells and Electromotility.Cold Spring Harbor perspectives in medicine · 2019
    Review
  8. Article
  9. Article
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  11. Review
  12. Article
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  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Xiaodong TanDepartment of Biomedical Sciences, Creighton University School of Medicine, 2500 California Plaza, Omaha, Nebraska 68178, USA.
Jason L Pecka
Jie Tang
Sándor Lovas
Kirk W Beisel
David Z Z He
Creighton University · US

Funding

ZINC FINGER-INSPIRED FLUORESCENT CHEMOSENSORSP20RR016469 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI EUDY, JAMES D · 2001 to 2011
$36.2M
BIOPHYSICS AND DEVELOPMENT OF COCHLEAR OUTER HAIR CELLSR01DC004696 · NIDCD · FATHER FLANAGAN'S BOYS'HOME · PI HE, ZHI-ZHOU · 2001 to 2016
$4.2M
CONSTRUCTION OF RESEARCH FACILITYC06RR017417 · NCRR · CREIGHTON UNIVERSITY · PI WILSON, M. ROY · 2002 to 2002
$2.0M
Functions and Disorders of K Channels in the Ineer EarR01DC008649 · NIDCD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN, TSUNG-YU · 2008 to 2012
$1.9M
NCRR NIH HHS C06 RR017417NCRR NIH HHS C06 RR17417-01NCRR NIH HHS P20 RR016469NIDCD NIH HHS R01 DC004696NIDCD NIH HHS R01 DC008649
6 · The paper itself

Abstract

Cochlear outer hair cells (OHCs) alter their length in response to transmembrane voltage changes. This so-called electromotility is the result of conformational changes of membrane-bound prestin. Prestin-based OHC motility is thought to be responsible for cochlear amplification, which contributes to the exquisite frequency selectivity and sensitivity of mammalian hearing. Prestin belongs to an anion transporter family, the solute carrier protein 26A (SLC26A). Prestin is unique in this family in that it functions as a voltage-dependent motor protein manifested by two hallmarks, nonlinear capacitance and motility. Evidence suggests that prestin orthologs from zebrafish and chicken are anion exchangers or transporters with no motor function. We identified a segment of 11 amino acid residues in eutherian prestin that is extremely conserved among eutherian species but highly variable among non-mammalian orthologs and SLC26A paralogs. To determine whether this sequence represents a motif that facilitates motor function in eutherian prestin, we utilized a chimeric approach by swapping corresponding residues from the zebrafish and chicken with those of gerbil. Motility and nonlinear capacitance were measured from chimeric prestin-transfected human embryonic kidney 293 cells using a voltage-clamp technique and photodiode-based displacement measurement system. We observed a gain of motor function with both of the hallmarks in the chimeric prestin without loss of transport function. Our results show, for the first time, that the substitution of a span of 11 amino acid residues confers the electrogenic anion transporters of zebrafish and chicken prestins with motor-like function. Thus, this motif represents the structural adaptation that assists gain of motor function in eutherian prestin.

Indexed as

ChickensEvolution, MolecularZebrafishAdaptation, PhysiologicalAmino Acid MotifsAmino AcidsAmino Acid SequenceAnimalsAnion Transport ProteinsAvian ProteinsConsensus SequenceElectric CapacitanceFormatesGerbillinaeHEK293 CellsHumansAmino AcidsAnion Transport ProteinsAvian ProteinsFormatesformic acidRecombinant Fusion Proteinsslc26a5 protein, zebrafishZebrafish Proteins

Identifiers

PMID22399806
PMCPMC3311934
OpenAlexW2070354600

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.