Evidence map›Paper›PMID 22399131›Full record

ArticleMetallomics : integrated biometal science2012

Evidence of Fe3+ interaction with the plug domain of the outer membrane transferrin receptor protein of Neisseria gonorrhoeae: implications for Fe transport.

Sambuddha Banerjee, Claire J Parker Siburt, Shreni Mistry, Jennifer M Noto, Patrick DeArmond, Michael C Fitzgerald, Lisa A Lambert, Cynthia N Cornelissen, Alvin L Crumbliss

Open access · bronzeAbstract read
In one paragraph

Article in Metallomics : integrated biometal science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Ferroptosis: A New Road towards Cancer Management.Molecules (Basel, Switzerland) · 2022
    Review
  3. Review
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Sambuddha BanerjeeDepartment of Chemistry, Duke University, Durham, NC-27708-0346, USA.
Claire J Parker Siburt
Shreni Mistry
Jennifer M Noto
Patrick DeArmond
Michael C Fitzgerald
Lisa A Lambert
Cynthia N Cornelissen
Alvin L Crumbliss
Duke University · USVirginia Commonwealth University Medical Center · USChatham University · US

Funding

Trichomonas Typing SystemU19AI031496 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HOBBS, MARCIA METZGAR · 1995 to 2014
$24.9M
A MOLECULAR STUDY OF THE GONOCOCCAL TRANSFERRIN RECEPTORR01AI047141 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI CORNELISSEN, CYNTHIA N · 2001 to 2010
$3.1M
Analysis of Protein-Ligand Binding on the Proteomic ScaleR01GM084174 · NIGMS · DUKE UNIVERSITY · PI FITZGERALD, MICHAEL C · 2009 to 2017
$2.6M
Genetic Susceptibility of Antibody-dependent Enhancement of FlavivirusesR21AI147141 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LIM, JEAN KYOU · 2019 to 2020
$465k
NIAID NIH HHS AI147141NIAID NIH HHS R21 AI147141NIGMS NIH HHS GM084174NIGMS NIH HHS R01 GM084174
6 · The paper itself

Abstract

Neisseria gonorrhoeae is an obligate pathogen that hijacks iron from the human iron transport protein, holo-transferrin (Fe(2)-Tf), by expressing TonB-dependent outer membrane receptor proteins, TbpA and TbpB. Homologous to other TonB-dependent outer membrane transporters, TbpA is thought to consist of a β-barrel with an N-terminal plug domain. Previous reports by our laboratories show that the sequence EIEYE in the plug domain is highly conserved among various bacterial species that express TbpA and plays a crucial role in iron utilization for gonococci. We hypothesize that this highly conserved EIEYE sequence in the TbpA plug, rich in hard oxygen donor groups, binds with Fe(3+) through the transport process across the outer membrane through the β-barrel. Sequestration of Fe(3+) by the TbpA-plug supports the paradigm that the ferric iron must always remain chelated and controlled throughout the transport process. In order to test this hypothesis here we describe the ability of both the recombinant wild-type plug, and three small peptides that encompass the sequence EIEYE of the plug, to bind Fe(3+). This is the first report of the expression/isolation of the recombinant wild-type TbpA plug. Although CD and SUPREX spectroscopies suggest that a non-native structure is observed for the recombinant plug, fluorescence quenching titrations indicate that the wild-type recombinant TbpA plug binds Fe (3+) with a conditional log K(d) = 7 at pH 7.5, with no evidence of binding at pH 6.3. A recombinant TbpA plug with mutated sequence (NEIEYEN → NEIAAAN) shows no evidence of Fe(3+) binding under our experimental set up. Interestingly, in silico modeling with the wild-type plug also predicts a flexible loop structure for the EIEYE sequence under native conditions which once again supports the Fe(3+) binding hypothesis. These in vitro observations are consistent with the hypothesis that the EIEYE sequence in the wild-type TbpA plug binds Fe(3+) during the outer membrane transport process in vivo.

Indexed as

Amino Acid SequenceBacterial Outer Membrane ProteinsBinding SitesBiological TransportCircular DichroismGonorrheaHumansHydrogen-Ion ConcentrationIronModels, MolecularMolecular Sequence DataMutationNeisseria gonorrhoeaeProtein BindingProtein Structure, TertiaryRecombinant ProteinsBacterial Outer Membrane ProteinsIronRecombinant ProteinsTransferrinTransferrin-Binding Protein A

Identifiers

PMID22399131
PMCPMC3391718
OpenAlexW2070962339

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.