Evidence map›Paper›PMID 22395867›Full record

ArticleEuropean journal of human genetics : EJHG2012

A 600 kb triplication in the cat eye syndrome critical region causes anorectal, renal and preauricular anomalies in a three-generation family.

Jeroen Knijnenburg, Yolande van Bever, Lorette O M Hulsman, Chantal A P van Kempen, Galhana M Bolman, Rosa Laura E van Loon, H Berna Beverloo, Laura J C M van Zutven

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In one paragraph

Article in European journal of human genetics : EJHG, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 62 citations in OpenAlex.

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  15. Clinical geneticists' views of VACTERL/VATER association.American journal of medical genetics. Part A · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jeroen KnijnenburgDepartment of Clinical Genetics, Erasmus Medical Center, Rotterdam, The Netherlands.
Yolande van Bever
Lorette O M Hulsman
Chantal A P van Kempen
Galhana M Bolman
Rosa Laura E van Loon
H Berna Beverloo
Laura J C M van Zutven
Erasmus MC · NLErasmus University Rotterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cat eye syndrome (CES) is caused by a gain of the proximal part of chromosome 22. Usually, a supernumerary marker chromosome is present, containing two extra copies of the chromosome 22q11.1q11.21 region. More sporadically, the gain is present intrachromosomally. The critical region for CES is currently estimated to be about 2.1 Mb and to contain at least 14 RefSeq genes. Gain of this region may cause ocular coloboma, preauricular, anorectal, urogenital and congenital heart malformations. We describe a family in which a 600 kb intrachromosomal triplication is present in at least three generations. The copy number alteration was detected using MLPA and further characterized with interphase and metaphase FISH and SNP-array. The amplified fragment is located in the distal part of the CES region. The family members show anal atresia and preauricular tags or pits, matching part of the phenotype of this syndrome. This finding suggests that amplification of the genes CECR2, SLC25A18 and ATP6V1E1, mapping within the critical region for CES, may be responsible for anorectal, renal and preauricular anomalies in patients with CES.

Indexed as

Abnormalities, MultipleAdultAmino Acid Transport System X-AGAneuploidyChromosome DisordersChromosome DuplicationChromosome MappingChromosomes, Human, Pair 22Eye AbnormalitiesFamilyFemaleGene DosageGenetic MarkersHumansInfant, NewbornIn Situ Hybridization, FluorescenceAmino Acid Transport System X-AGATP6V1E2 protein, humanCecr2 protein, humanGenetic MarkersMitochondrial ProteinsSLC25A18 protein, humanTranscription FactorsVacuolar Proton-Translocating ATPases

Identifiers

PMID22395867
PMCPMC3421127
OpenAlexW1995926227

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.